Gene M446_6189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6189 
Symbol 
ID6131087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6801993 
End bp6802913 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content77% 
IMG OID641646280 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001772891 
Protein GI170744236 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.826547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCG ACGGCATGGC CGGGCGGGCG ATCCTCATCG CAGGGCCGAC CGCCTCGGGC 
AAGTCGGCGC TGGCCCTGGC GCTGGCCCGC GCGCGGGGCG GCGTGGTGAT CAACGCCGAC
TCGATGCAGG TCTACGCGGA TCTGCGCGTG CTGACCGCCC GCCCGAACCC CGCCGAGGAG
GCGCAGGCGC CCCACCGCCT CTACGGCAGC GTCGACGGCG CGGTGAATTT CTCGGTCGGC
CACTACCTCG CCGCGGTGGG GGAGGTGCTG CGGGAGGTCT GGGCGGCGGG AGGCCTGCCG
ATCGTGGTCG GCGGCACCGG GCTCTACTTC AAGGCGCTGC TGGAGGGCCT CTCCGAGATC
CCGCCGGTGC CGGAGGCGGT GCGGACCGCC CTGCGGGCGG AGGCGGAGGG CCGCGAGACC
GCCGCCCTCC ACGCCGACCT CGCCCGGCGC GACCCGGAGG GCGCGGCGCG GCTCGGCGCC
CACGACCGCC TGCGGGTGCT GCGGGCCCTG GAGGTGCTCG CCGCCACCGG GCGCCCGCTC
TCGGCCTTCC AGGGCAGCCG CCGGCCGGGA CCGCTCGCGG GAATGCCCTG CGACAAGCTC
TTCCTGGTCC CGGATCGGGC GCTCCTGCGG GCCCGGATCG ACGCGCGCTT CCTCGCCATG
ATGGAGGAGG GCGCCCTCGA CGAGGTGGCG CGCCTGCGCG CCCGCCGCCT CGACCCGATG
CTGCCGGTGA TGCGGGCCCA CGGGGTGCCG GGCCTGATCG CCTTCCTGGA CGGGGCGCTC
ACCCGCGAGG AGGCGGTCGC CCGGGGGCAG GCGGACACGC GGGCCTACGC CAAGCGCCAG
GTGACGTGGT TCCGCCACCA GGCCGGGGCA GGCTGGCGCT GGCTCGCGCC GGAGGCGGCG
ATGCGGGAGG CGGGAGGGTA G
 
Protein sequence
MGTDGMAGRA ILIAGPTASG KSALALALAR ARGGVVINAD SMQVYADLRV LTARPNPAEE 
AQAPHRLYGS VDGAVNFSVG HYLAAVGEVL REVWAAGGLP IVVGGTGLYF KALLEGLSEI
PPVPEAVRTA LRAEAEGRET AALHADLARR DPEGAARLGA HDRLRVLRAL EVLAATGRPL
SAFQGSRRPG PLAGMPCDKL FLVPDRALLR ARIDARFLAM MEEGALDEVA RLRARRLDPM
LPVMRAHGVP GLIAFLDGAL TREEAVARGQ ADTRAYAKRQ VTWFRHQAGA GWRWLAPEAA
MREAGG