Gene M446_6172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6172 
Symbol 
ID6135485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6789279 
End bp6789776 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content76% 
IMG OID641646264 
Productpeptide deformylase 
Protein accessionYP_001772875 
Protein GI170744220 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATCC TGCCCCTGCT GCGCTACCCG GATGCCTGCC TGCGGCGGGC GGTGCCGCCG 
GCCGCCCTCC CCGACCCGCG CGTCGCCGCC TTCGCGGCGG ACCTCGCCGA GACGCTCGAC
GCGCATCGCG CGATCGGCCT CACCGGGCCG CATGTCGGGG CTTCGATCCG GCTCACCGTG
ATCCGGCTCG GGCCGGGAGC CCCGCTCATG ACCTGCGTCA ACCCGCAGGT CGTCCACGCC
TCCCCCGAGA CGGCGCGCCA CCGCGAGGGC AGCGTGGCGA TGCCGGGCGT CGACGAGGAG
GTCGAGCGCC CGGCCCGGGT GCGGGTGCGC TACCAGGACC TCGACGGCAC CGCCCGCGAG
GTCGAGGCCG AGGGCTTCCT CGCCGCCTGC CTGCAGCACG AGATCGACCA GCTCGACGGC
GTGTTCTGGA CCGAGCGCCT GTCGCGCCTG AGGCGCGAGC GGCTGCTCAA GCGCTTCGCC
CGCGCGGGGC GCTCCTGA
 
Protein sequence
MAILPLLRYP DACLRRAVPP AALPDPRVAA FAADLAETLD AHRAIGLTGP HVGASIRLTV 
IRLGPGAPLM TCVNPQVVHA SPETARHREG SVAMPGVDEE VERPARVRVR YQDLDGTARE
VEAEGFLAAC LQHEIDQLDG VFWTERLSRL RRERLLKRFA RAGRS