Gene M446_6136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6136 
Symbol 
ID6131011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6750564 
End bp6751997 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content68% 
IMG OID641646233 
Productgeneral substrate transporter 
Protein accessionYP_001772845 
Protein GI170744190 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00883] metabolite-proton symporter 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATT TCGCCCCCGA GGATCGCTCA CGATCCAAGA TCGCCACCGT GCTGCGCGTC 
ACGAGCGGCA ATTTTCTAGA GATGTTCGAC TTCTTCCTGT TCGGGTTCTA CGCCACCTAC
ATCTCCAAGG CGTTCTTCCC GACCGGCAAC GAGTATGCCT CGTTGATGCT CACCTTCGTG
ACCTTCGGGG CGGGCTTCCT GATGCGGCCC CTCGGCGCCA TCTTCCTCGG CGCCTACGTC
GACCAGGTCG GGCGCCGGCA GGGCCTCATC GTCACCCTCG GCATCATGGC GATGGGCACG
ATCCTGATCG CCTTCGTGCC CTCCTACGCG ACCATCGGGC TCCTCGCCCC GTTCCTGGTG
CTGATCGGCC GGCTGCTGCA GGGCTTCTCG GCGGGCGTCG AACTCGGCGG CGTGTCGGTC
TACCTCGCCG AGATGGCGAC CCCCGGCAAG AAGGGCTTCT ACGTCTCCTG GCAGTCGGGC
AGCCAGCAGG TCGCCATCAT GGTCTCCGCG CTGATCGGCT ACGTCCTGAG CCAGGCGCTC
ACGCCGGAGG CCTTGGGCTC CTGGGGCTGG CGCATCCCCT TCGTCATCGG CTGCCTGATC
GTGCCGTTCC TGTTCTACAT CCGCCGCTCG CTGGAGGAGA CGGAGGAGTT CCTGCACCGC
AAGCATCGTC CCACGGCCCG TGAGATCTTC GCCTCGCTCG GCCGCAACTG GCAGATCGTG
CTGCTCGGCA TGCTGCTCGT GGTGATGACC ACGGTCTCGT TCTACACGAT CACGGTCTAC
ACCCCGACCT TCGGCAAGAG CGTGCTGAAG CTGTCGGCGG AGGACAGCCT CCTCGTCACC
TTCTGCGTCG CGGTGTCGAA CTTCTTCTGG CTGCCGGTGA TGGGCGCGCT CTCGGACCGG
GTCGGCCGCA AGCCCATCCT GCTGGTGTTC TCGGCCCTGA CGCTACTCAC CGCCTACCCG
GCGCTGGCGT GGCTCGTCGC CAACACCTCC TTCACCAACA TGCTGATCGT GCTCCTGTGG
CTGTCCTTCC TGTACGGGAG CTACAACGGC GCGATGGTGG TGGCGCTGAC CGAGATCGTG
CCGGCGAGCG TGCGCACGGC CGGCTTCTCG CTCGCCTACT CGCTCGCCAC CGCGCTGTTC
GGCGGCTTCA CCCCACTGGT CTCGACCTGG CTGATCGAGG TGACCGGGAA CCGTGCCGCC
CCGGCCTTCT GGCTGGCCTT CGCGGGCGCC TGCGGCCTCG TCGCGACGCT GCTCATCTAC
CGGGAGCGGA GCCACGCGAA GGGGGGCTCG CCCGGGACGC TGCGATGGCC TGACCTCCCG
CTGACCGCTC GCGACCGGCG CAGCTCAGCA CGCGCGCCGG CCGCGAGCGC GACCGCCCCG
TTCTCCGGGC GCTGCGGGTG GCCCGACCTC TGCCCTGATG GAGAAGACTC GTGA
 
Protein sequence
MAHFAPEDRS RSKIATVLRV TSGNFLEMFD FFLFGFYATY ISKAFFPTGN EYASLMLTFV 
TFGAGFLMRP LGAIFLGAYV DQVGRRQGLI VTLGIMAMGT ILIAFVPSYA TIGLLAPFLV
LIGRLLQGFS AGVELGGVSV YLAEMATPGK KGFYVSWQSG SQQVAIMVSA LIGYVLSQAL
TPEALGSWGW RIPFVIGCLI VPFLFYIRRS LEETEEFLHR KHRPTAREIF ASLGRNWQIV
LLGMLLVVMT TVSFYTITVY TPTFGKSVLK LSAEDSLLVT FCVAVSNFFW LPVMGALSDR
VGRKPILLVF SALTLLTAYP ALAWLVANTS FTNMLIVLLW LSFLYGSYNG AMVVALTEIV
PASVRTAGFS LAYSLATALF GGFTPLVSTW LIEVTGNRAA PAFWLAFAGA CGLVATLLIY
RERSHAKGGS PGTLRWPDLP LTARDRRSSA RAPAASATAP FSGRCGWPDL CPDGEDS