| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6111 |
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| Symbol | |
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| ID | 6134951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium sp. 4-46 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010511 |
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| Strand | - |
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| Start bp | 6720733 |
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| End bp | 6725409 |
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| Gene Length | 4677 bp |
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| Protein Length | 1558 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641646209 |
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| Product | YD repeat-/RHS repeat-containing protein |
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| Protein accession | YP_001772821 |
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| Protein GI | 170744166 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.25246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAC TTGGAAGCGT GGGGACCGGG CGAAAGTGGA TTGTTCTTCT GGCGGCTTGG
CTGATCGTCG GGATCGCATC GACGCGCGTC GTGGCCGCGA GGACCGAGGC TGAGGGGGCC
GATGCATTCC GCCTTGCAAT CGTCCAGCTG GCCGAGCCGC TGGTCCGGAC GCGACCGACG
ACCGCCGCCG AGGACCAGGA CCTCGCGGCC GCGCTGGCAC GCTTTCGCGC GCGGGCCCAG
GTGGACGACC TCGCGGCCCT CGAAGCCTTC CTGGATGCGC ACCCGGATAG CGGCTGGGCG
CCCGCGCTCC ATCTCAATGT CGGCCTGACC TATCGCCATT ACGGCTACGT GACGCGGGCC
GGGACGGCTT GGCGCGCGGC CTGGCGGCTC GGACGCGCGG CGCAGGATCC GGAGGCGCGG
GCGCTCGTGG ACCGCGCCGT CGGGGAGCTG GCGCTCCTCC TCGCCTCCCT CGGGGACAGC
GACGCCCTGG CGACCCTGTT CGCGGAGATC GGGGCGAGGC CCGTCACCGG CCCGGCGACG
GAGAAAATCC AGGTCGCCCG CGAGACCCTG GATCTCGTCA CCAAGGATCC GCGCCACCTG
TTCAATTGCG GGCCCCTCGC CCTGCGAAGC CTCCTCGTCG CGCGTGGGGG CAGCCCGGCG
GAGGCGGAGG CGCTGCGCTG GCTCCGGGTC GGCCCGAACG GCACGAGTCT GGCGGAGGTC
TCGGCGCTGG CGAGCAAGGC GGGGGCCCCG CATCGGCTCG TGCGGCGCGA GCCGGGCCAG
CCGGTCCCGG TGCCCTCCGT GATGCACTTC AGGGCCGGGC ACTTCGCGGC CATCGTGGCG
GCGGAGAACG GCCGCTTCCA CCTGCACGAT CCCGTCCTGG GCGGGCAGGA GCTGTGGCTC
ACGACCGGCG CCGTGGATGC CGAGGCCAGC GGGTACTTCC TGGTGCCCGA CGGCGCGGCG
AAGACCGCCG GCCAGGATTG GAGGGAGGTC GCCCCCGCCG AAGCCGGTCA GGTCTGGGGC
AAGGGACCGA CGAACGGCGT CGTCCCGGGC GATGCCGGGG ATCCCCTGGC CAGCGCGCCG
AGCCCGAATT GCGGGATGTG CGGCACCAAC ATCAAGGAGG CCACCGTCGG CCTCACCCTG
TCGGATATGC CGGTCGGCTA CGTCCCGGCC ATCGGACCGG AGGTGCGCAC CCGCATCAGC
TACAACCAGC GGGAGGATAG CCAGCCTTCG GTGTTCGGCT TCTTCAACCT CGGTCCGAAA
TGGACCATCA ACTGGTTGAG CTACGTCTCG GACGACCCGC AGAACCCGGG CGGGAACGTG
TCCCGGGTGA TCGCGACGGG GGGCGCCTAC TTCTACACGG GGTATTCCGG AACGACCGGC
GCGTTCGCGC CCCAGAGCGA CGACGGCTCG GTTCTCACCC GGGCGGCGGA ATCTCCGATC
GCGTATCGCC GCAGGCTGCG CGACGGGACG ACAGAGATCT ACGCCGAATC GGACGGCAGC
ACCGGCTTCC CGCGCCGCAT CTTCCTCAGC AAGGTGGTGG ACCCGCAGGG CAACGCGCTC
AGCTTCACGT ACGATGCGCA GCTGCGCCTG ACGGCGCTGA CCGACGCGGT CGGGCGGCAG
ACGCGTTTCG GCTACGGGCA GCCGGGCCGG CCGCTGCTGC TCACCCAGAT CACCGACCCG
TTCGGCCGCA GCGCCTCCCT GTCCTACGAC GGGCTCGGAC GGCTGAGCGC CATCACGGAC
GTGATCGGGC TGACCTCGCG CTTCACCTAC GACGCCAACG GCCTCGTGAC CGCGCTGACG
ACGCCCTACG GCACGACCCG CTTCGCCTTC ACGGCCCCCG GCACCAGCGC GCCCCCGCGC
TTCGTGGACG TGACCGATCC CCTCGGCTTC CACGAACGCG AGGAGTGGCT CGAACCCGCC
CCGATCCCCG ACAGCGAGCC GGCCGCGACC GTGCCGCAGG GCATGCCGGT GGCGCCGGCC
AACCAGTACC TCACCTACCG GAACAGCTTC CACTGGGACA AGGACGCCTA CGAGCAGGCC
GGATGCACGC CCGCGGGTGG GTGCGACTAC GCGAAGGCCC GCCTCCGTCA CTTCGTGCAT
GCCGGCAACG GCATCAAGGG CGTGGCCATC GAGAGCGAGA AGCAGCCGCT CGAGAACCGG
GTCTGGTACA ATTACCCGGG ACAGACGGAC GCGATTTCCA GTGGTGCCTT CAACCGCCCG
AGCGCGGTGG CGCGCGTGCT CGACGACGGC ACGACGCAGC TGACGCGCTT CGATTACGAC
ACGACGGGCT ACAACCTGTC CCGCATCGTC GATCCGCTCG GCCGCACGAC GCACCTCACC
TACGCCCCGA ACGGAATCGA CCTCCTGGCG GTCACCCAGG TCTCGGGGCC GGGGAGCTTC
GCGCCGCTCG CGCAATTCAC CTATGACGGA CAGCATCGTC CGATCGTCCA CACCGACGCG
GCCGGCGCGA CCTCGACCTT CGCGTACAAT GCGGCCGGGC AGCTGACCGC GGCGACGAAC
GCCCTGAACG AGACCACCCG CTTCACCTAC GATCCGGCGG GCAACCTGCT CAGCGTCGTC
AACGCCACCG GGGCGAGTGC CGCGACCTTC ACGTACGACG CGGCCGACCG GGTCCGGACC
TACACCGATT CCGAGGGCTG GACCGTCACC TACGCGTACG ACGCGGCCGA CCGGATCACC
GCGATCACCT ATCCGGACGG GACCTCCCAG ACCTACAGCT ACGACCGGCT CGACCTCGTT
GGATACCGGG ACCGGCAGTT CCGGACCTGG ACCTACGGCT ACGATGCCAA CCGGCGGCTG
ACCAGCCTGG TCGATCCGGG CGGCAGCCGG ATGCTGTTCG GCTATACCGG CCAGGGCCGG
CTGGCCAGCC TGACCGACGC CAAGGGCGCC GTCACCCGCT GGAGCTACGA CGTCCAGGGG
CGCCCGATCG CCAAGCGCTA CGCGGATGGC AGCACGGTCA CCTCCGCCTA CGAGACCGCG
ACGAGCCGCC TCAAATCGGT CACCGACGCG CTCTCCCAGG TGAAGCAGTA CAGCTACGCG
CGGGACGACC GGCTGTCGGG GATCAGCTAC CCCAACGCCC TGAACGCCAC GCCGGCCGTG
ACCTTCGCGG ACGATCCCTT CTTCCCCCGC ACGCTGTCGA TGAGCGACGG CACCGGCACG
ACCCGCTACA GCTACGCGCC GAGCTTCGCG CCGGGAGCGC AGCAACTCGC CCGGGAATGC
CTCGTCCCAG CCGGCGCCGG CGACTGCGCC TGGAGCATCG CCTACACCTA CGACGCGCTC
GGCCGGATGA TCGCGCGCAG CGTGTCGGGC TCCGGGCCGG AGACCGTCGC CTACGACGCG
CTCGGCCGCA TCACCCGCCA CGGCAGCGAC CTCGGCTCCT TCGCCCTGTC CTATCTGGGC
CAGACCGAGC AGCCCACCCT GCGCCAGCTC CTGCCGGCGG GCGCGAGCCT CGCCACCACC
TGGAGCTACC TGCCCAATGC CGGCGACCGG CGCCTCGCCG GGATCGCCCA TACGGGCCTC
GCCCCCGGCC AGTTCCTCAC GCTCGCATTC ACCTCCGCGC CCGAGACCCT GATCACCGGG
GTCACCGAGA CGAGCGACGT CCCCTCCCCG GTCCCGCCGG CGGGCAGTCA GACGGCACAG
TACAACGTCC TCAACCAGCT CACCGGCCTC TCGGGGCAGG CCCTGACCTA CGACGCCAAC
GGCAACCTCG TCTCGGACGG GCCACGCGTC TTCGCCTGGG ACGCCGAGGA CCGGCTGGTG
CGCATCACCT ATCCGGCCCA GCCCGGCAAG GTGAGCAGCT TCACGTATGA CGGGCTGGGT
CGGCGGGTGA CGATCGGCAG CACGCCGGCG GGCGGCGCGG CGGCAAGCGT AACGGCGTAT
GTCTGGTGCG GCGAGAGCCT GTGCCAGTCC CGGACCCAGG CGGGCGCGGT GCTGCGGTCG
TACCTGGCGG AGGGCGAGGT GGCGGCGGGC GCGCCGGGGC AGCGCTTCTA TTACGGGATC
GACCAGATCG GCTCGGTGCG GCGGGCCTTC GCGAGTGCGG GCGGCGCCCC GGCCTTCGCC
TACGATCCTT ACGGGAACGC GCTTCAGGGC GGCGCGCCGG TCACGGATTT CGGGTTCGCC
GGCATGTTCT ATCATGCCGA GAGTGGTCTA TATCTGACAC ACTTCCGAGC TTACGATCCA
GCTATCGGCC GGTGGATCTC GAGAGACCCT ATCGGAGAGC TTGCCGATGT TACAAGCCAT
CCCCAATCTG ATGACGCATT TTTCAACTTC AGGCCTTTCG ATGGCCAGTC CTTATCAACG
CTTCGGCTTA GTGCGGGCGC CAAAAGACCT CACTGGCCGG CACTCTCAAC CTTGGAAGCG
AACCGAGGGA GGCTCCTCGC TCCAAGTGCG CTCTCGCTTT ACGACGGACT GAGCCTATAC
AGTTACGTTG CGCAAAATCC GCTGGCGCGC ACGGACCCGC AGGGCCTCTC CGGTTTTCGG
TGTGATGGAT TTTCCGCAGG ATGCCAGAGT GGCGGCACAT ACGGTACAAC CGCCATGTAC
TGCGTCAGGG GGAGAAAGCT CTGCTTCGAC TGTGCAGTCA AATATCTTGG GTTGGATGGA
GAGCCAAATC ATGTGAAATT GAAAGCTCTT GAGCGGTATC TAATTGAGGA AGATTAG
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| Protein sequence | MSVLGSVGTG RKWIVLLAAW LIVGIASTRV VAARTEAEGA DAFRLAIVQL AEPLVRTRPT
TAAEDQDLAA ALARFRARAQ VDDLAALEAF LDAHPDSGWA PALHLNVGLT YRHYGYVTRA
GTAWRAAWRL GRAAQDPEAR ALVDRAVGEL ALLLASLGDS DALATLFAEI GARPVTGPAT
EKIQVARETL DLVTKDPRHL FNCGPLALRS LLVARGGSPA EAEALRWLRV GPNGTSLAEV
SALASKAGAP HRLVRREPGQ PVPVPSVMHF RAGHFAAIVA AENGRFHLHD PVLGGQELWL
TTGAVDAEAS GYFLVPDGAA KTAGQDWREV APAEAGQVWG KGPTNGVVPG DAGDPLASAP
SPNCGMCGTN IKEATVGLTL SDMPVGYVPA IGPEVRTRIS YNQREDSQPS VFGFFNLGPK
WTINWLSYVS DDPQNPGGNV SRVIATGGAY FYTGYSGTTG AFAPQSDDGS VLTRAAESPI
AYRRRLRDGT TEIYAESDGS TGFPRRIFLS KVVDPQGNAL SFTYDAQLRL TALTDAVGRQ
TRFGYGQPGR PLLLTQITDP FGRSASLSYD GLGRLSAITD VIGLTSRFTY DANGLVTALT
TPYGTTRFAF TAPGTSAPPR FVDVTDPLGF HEREEWLEPA PIPDSEPAAT VPQGMPVAPA
NQYLTYRNSF HWDKDAYEQA GCTPAGGCDY AKARLRHFVH AGNGIKGVAI ESEKQPLENR
VWYNYPGQTD AISSGAFNRP SAVARVLDDG TTQLTRFDYD TTGYNLSRIV DPLGRTTHLT
YAPNGIDLLA VTQVSGPGSF APLAQFTYDG QHRPIVHTDA AGATSTFAYN AAGQLTAATN
ALNETTRFTY DPAGNLLSVV NATGASAATF TYDAADRVRT YTDSEGWTVT YAYDAADRIT
AITYPDGTSQ TYSYDRLDLV GYRDRQFRTW TYGYDANRRL TSLVDPGGSR MLFGYTGQGR
LASLTDAKGA VTRWSYDVQG RPIAKRYADG STVTSAYETA TSRLKSVTDA LSQVKQYSYA
RDDRLSGISY PNALNATPAV TFADDPFFPR TLSMSDGTGT TRYSYAPSFA PGAQQLAREC
LVPAGAGDCA WSIAYTYDAL GRMIARSVSG SGPETVAYDA LGRITRHGSD LGSFALSYLG
QTEQPTLRQL LPAGASLATT WSYLPNAGDR RLAGIAHTGL APGQFLTLAF TSAPETLITG
VTETSDVPSP VPPAGSQTAQ YNVLNQLTGL SGQALTYDAN GNLVSDGPRV FAWDAEDRLV
RITYPAQPGK VSSFTYDGLG RRVTIGSTPA GGAAASVTAY VWCGESLCQS RTQAGAVLRS
YLAEGEVAAG APGQRFYYGI DQIGSVRRAF ASAGGAPAFA YDPYGNALQG GAPVTDFGFA
GMFYHAESGL YLTHFRAYDP AIGRWISRDP IGELADVTSH PQSDDAFFNF RPFDGQSLST
LRLSAGAKRP HWPALSTLEA NRGRLLAPSA LSLYDGLSLY SYVAQNPLAR TDPQGLSGFR
CDGFSAGCQS GGTYGTTAMY CVRGRKLCFD CAVKYLGLDG EPNHVKLKAL ERYLIEED
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