Gene M446_6024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6024 
Symbol 
ID6135924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6610741 
End bp6611898 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content77% 
IMG OID641646123 
Productmajor facilitator transporter 
Protein accessionYP_001772735 
Protein GI170744080 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.252453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0648485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTCC GCCTCGGCCG CCCCCTCGCC ATCCTGGCCG CCACGCAGGT GATCGGGTGG 
GGCAGCATCC TCCTGCCCCC GGTGATCGGC GCCCGGATGG GGGCCTCCCT CGGCCTCGAC
CTGCCCACCG TTCTGGCCGG ATCCTCGCTC GTGATGGTGG TGTCGGGGCT CGCCTCGCCG
CTCCTCGGCC GAGCCTACGC GCGCATCGGG GCGCGGTCCG TGATGATGGC CGGGTCCCTC
CTCGGCGCCG CCGGCCTGCT GCTGCTCTCG GCCGCCGCCG GCCTCGCGAG CTACCTGCTC
GCCTGGGCGG TGCTCGGCCT CTTCGGCGCG GCGATGCTCT CGACCAGCGC CAACGCCTAC
CTGACCGAAC TCGCCGGGCC CCGCGCCCGC AGCGCGATCG GCCTCGTGAT GCTGGTGACG
GGCCTCGCCA CCGGGATCTT CTGGCCGCTC ACCGCCTGGC TCGACGCCGC GATCGGCTGG
CGCGGGGCGG TGCGGCTCTA TGCCGGGCTC CAGCTCGCCC TCGTGCTGCC GCTGCTCGCC
TGGCTGCCGC CCGCGCGGGG CCCGGTCTCG GCCACCGCGG CGGCGCCCGC GCCCTCCGCC
GCCGATTCCC CCTTCCGGCT GATGGCGGCG GCGATCGGGC TCAGCGGCTT CGTCTCCTTC
GGGCTCGAAG CGGTCACCAT CGCGCTCCTC ACCGCCTACG GCTTCGGCAC CGCCGAGGCC
GTCGCCGCCG GCTCCGCCAT GGGCCTGCTC AAGGTCGCCG GGCGGATGAT CGACATGGCC
GGCGGCGCGC GTTGGGACGG CCTGACCACC GGGATCGTCG CCACCGGGGC GATGCCGCTC
GGCCTCGCGG CGCTGCTCCT CGGCGGCGGC GGCAGCGCGG CGGCCCTGGT CTTCGCGGTC
CTGTTCGGGC TGGGCAGCGG CGCCTTCGCG ATCGCCCGGG CGACGATGCC CCTCGTCTTC
TACGACGGGG CCGCCTACGG CGCGGCGCTG GCGCGGATCG CGCTGCCGCT CAACCTCGCG
GCCGCGGCGG CGCCGCCGCT CCTCGGTGCC CTGCTGACCC GGTTCGGGCC GGCCCCCGCG
CTCGCCACCG CGATGGGCTG CTCGCTCGCG GCCTGCGCCC TGCTCGCGCG CCTCGCCCGG
CTGCGGCCGG CCCGCTGA
 
Protein sequence
MQVRLGRPLA ILAATQVIGW GSILLPPVIG ARMGASLGLD LPTVLAGSSL VMVVSGLASP 
LLGRAYARIG ARSVMMAGSL LGAAGLLLLS AAAGLASYLL AWAVLGLFGA AMLSTSANAY
LTELAGPRAR SAIGLVMLVT GLATGIFWPL TAWLDAAIGW RGAVRLYAGL QLALVLPLLA
WLPPARGPVS ATAAAPAPSA ADSPFRLMAA AIGLSGFVSF GLEAVTIALL TAYGFGTAEA
VAAGSAMGLL KVAGRMIDMA GGARWDGLTT GIVATGAMPL GLAALLLGGG GSAAALVFAV
LFGLGSGAFA IARATMPLVF YDGAAYGAAL ARIALPLNLA AAAAPPLLGA LLTRFGPAPA
LATAMGCSLA ACALLARLAR LRPAR