| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6020 |
|---|
| Symbol | |
|---|
| ID | 6135442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6605829 |
|---|
| End bp | 6606668 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641646119 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001772731 |
|---|
| Protein GI | 170744076 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0301148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTGGCGA TCGCCGAAAC CGGCTCCTTC ACCCAGGCCG CCGAGCGCGT GCACAAGACG
CAATCGGCCG TCTCGATGCA GATGAAGCGG CTGGAGGAGC GGATCGGGCG CGAGATCTTC
GCCCGGGCCG GGCGCGGGGT GCGGCTCACC GACGACGGGG AGCGCCTCCT CGACTACGCG
CGGCGGATCG TGTGGCTGCA GACCGAGTGC CTCGCGCGCT TCGCCGAGGG CGACCTCGCG
GGCCGGGTGC GGCTCGGCCT GCCCGACGAC TACGCCGAGC GCTACCTGCC GGAGATCCTG
GCCCGCTTCG CGCGGGCGCA TCCGCGCGCC GAGGTGACGG TGGTCTGCGA GCCCACCGAC
ATGCTGGTCG CCCGGATCGG GAGCGGCGAC CTCGACCTCG CCATCATCAC GGAGGCGCGC
CACCGCGGCA GCATCGAGAC GATCCGCACC GAGGCGCTGC TCTGGGTCGG GTCGGGCCGC
CACCGCACCC ACGCGCAGAC GCCCCTGCCG CTCGCCCTCG GGCGCCCGGC CTGCGTCTGG
CGCGCGGCGG CGCTCGCGGC CCTGGAGCGG GTCGGCCGCC CCAACCGCAT CCTGTTCGTG
AGCTGGAGCT CGACCGCGGT CGGCGCCGCG GTGCTGGCGG GCCTCGCCGT CTCGGTCCTG
CCCGAGAGCG CGCTCAGGCC CGGGATGCGG ATCCTCTCCC CGGCGGACGG GTTTCCCGCC
CTCCCCACCT GCCGGATCGG GCTCATGCGC CCGCGCATCC CGGAGCCGAT GCCGCTGGCC
GACGCCCTCG CGGCGCAGAT CCGCGAGTGC CTCGACAATC TCGGGATCGC CGCGGAATAG
|
|---|
| Protein sequence | MVAIAETGSF TQAAERVHKT QSAVSMQMKR LEERIGREIF ARAGRGVRLT DDGERLLDYA
RRIVWLQTEC LARFAEGDLA GRVRLGLPDD YAERYLPEIL ARFARAHPRA EVTVVCEPTD
MLVARIGSGD LDLAIITEAR HRGSIETIRT EALLWVGSGR HRTHAQTPLP LALGRPACVW
RAAALAALER VGRPNRILFV SWSSTAVGAA VLAGLAVSVL PESALRPGMR ILSPADGFPA
LPTCRIGLMR PRIPEPMPLA DALAAQIREC LDNLGIAAE
|
|---|
| |