Gene M446_6017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6017 
Symbol 
ID6135439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6604083 
End bp6604970 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID641646116 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001772728 
Protein GI170744073 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0299425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA TCCCCTTCGA CCAGCGTGAA GGCCACATCT GGTTCGACGG CCGCATGGTG 
CCGTGGGCGG ACGCGAAGAT TCACGTCCTC AGCCACGGGC TCCATTACGG CTCCTGCGTG
TTCGAGGGCG AGCGCGCCTA TGGCGGGCAG ATCTTCAAGA GCACGGAGCA TTCGCAGCGG
CTGCGCCGCT CGGCCGAGCT CCTCGATTTC GAGATCCCGT TCTCCGTGGC CGAGATCGAC
GCCGCCAAGG CCCTCGTCCT GAAGGAGAGC GGTCTGCAGG ACGCCTATCT GCGCCCGGTG
GCGTGGCGCG GCTCGGAGAT GATGGGCGTC TCGGCGCAGA ACAACACCAT CCACCTCGCC
ATCGCGGCCT GGGAATGGCC GAGCTACTTC GACCCGGCCA CCAAGATGAA GGGCATCCGC
CTCGACCTCG CCGAGTACCG GCGTCCCGAC CCGCGCACGG CGCCCTCCGC CTCGAAGGCG
GCGGGCCTGT ACATGATCTG CACGATCTCC AAGCACCGGG CCGAGAAGAA GGGCTACGCC
GACGCGCTGA TGCTCGACTG GGAGGACAAC GTCGCCGAGT GCACCGGCGC CAACGTCTTC
TTCATCCGGG ACGGCGCGAT CCACACCCCG CTCGCCGACC GCTTCCTCAA CGGCATCACC
CGCCAGACGG TGATCGAGCT CGCCCGCCGC CGCGGCGTCG AGGTGATCGA GCGGCGCATC
CGGCCCGAGG AGATGGCGGG CTTCTCGGAG TGCTTCATCA CCGGCTCGGC CGCCGAGGTG
ACCCCGGTCT CCGAGATCGG CCCCTACCGG TTCCACCCGG CGGCGCTCAC CCGCGCCCTG
ATGGACGATT ACACCGCCGA GGTGCAGCCC CGCGCCAAGG CGGCCTGA
 
Protein sequence
MSVIPFDQRE GHIWFDGRMV PWADAKIHVL SHGLHYGSCV FEGERAYGGQ IFKSTEHSQR 
LRRSAELLDF EIPFSVAEID AAKALVLKES GLQDAYLRPV AWRGSEMMGV SAQNNTIHLA
IAAWEWPSYF DPATKMKGIR LDLAEYRRPD PRTAPSASKA AGLYMICTIS KHRAEKKGYA
DALMLDWEDN VAECTGANVF FIRDGAIHTP LADRFLNGIT RQTVIELARR RGVEVIERRI
RPEEMAGFSE CFITGSAAEV TPVSEIGPYR FHPAALTRAL MDDYTAEVQP RAKAA