Gene M446_6012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_6012 
Symbol 
ID6135434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6598413 
End bp6599393 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content75% 
IMG OID641646111 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001772723 
Protein GI170744068 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00564749 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACATCC TGATCCTCGG CGCGGCCGGC ATGGTCGGCC GCAAGCTCCT CGCCCGCCTC 
CTGCGCGACG GCCGGCTCGG GGCCGAGCCG ATCACCCGGC TCACCCTGCA CGACGTGGTG
GCGCCCGAGG CGCCCGCCGC CCGCTTCCCG GTCGCGCTCT CGGCCTCGGA CCTGTCGCTG
CCCGGCGAGG CGGAGCGGCT GGTCGCCGGC CGCCCCGACG TCATCTTCCA CCTCGCGGCG
ATCGTCTCGG GCGAGGCGGA GGCCGATTTC GACAAGGGCT ACCGGATCAA CCTGGACGGC
ACGCGGGCCC TCCTCGACGC GGTGCGGGCG ATCGGGGACG GCTACCGCCC GCGCCTCGTC
TTCACCTCCT CGATCGCGGT CTTCGGCGCG CCGATGCCCG ACGTGATCGG CGACGAGTAC
CTGACCGCCC CGCTCACCAG CTACGGCACC CAGAAGGCGA TCGGCGAGCT TCTCCTCTCG
GACTACACGC GGCGGGGCTT CCTCGACGGG GTCGGGATCC GGCTCCCCAC GATCTGCGTG
CGGCCGGGCA AGCCCAACAA GGCGGCCTCG GGCTTCTTCT CGGGCATCAT CCGCGAGCCG
CTCGCCGGGC AGGAGGCGGT GCTGCCGGTG CCCGACGGCG TGCGCCACTG GCACGCCTCG
CCCCGCGCCG CGGTCGGCTT CCTCCTCCAC GCCGCCACGA TCGAGGGCGC GCGGCTGGGC
GACCGCCGCA ACCTGACCAT GCCGGGCGTC GCCGTCACGG TGGCCGAGCA GATCGAGGCC
CTGCGCCGCG TCGCCGGCGA GGCGGTGGTC GCGCGCATCC GCCGCGTCCC CGACCCGACG
GTCGAGCGCA TCGTGGCGGG CTGGCCGCGC GCCTTCGACC CCCGCCGGGC GCTGGACCTC
GGCTTCACGG CGGAGCCGGA TTTCGAGACG ATCATCCGGG TGCATATCGA GGACGAGCTC
GGCGGCAGGA TCGCCGCCTG A
 
Protein sequence
MHILILGAAG MVGRKLLARL LRDGRLGAEP ITRLTLHDVV APEAPAARFP VALSASDLSL 
PGEAERLVAG RPDVIFHLAA IVSGEAEADF DKGYRINLDG TRALLDAVRA IGDGYRPRLV
FTSSIAVFGA PMPDVIGDEY LTAPLTSYGT QKAIGELLLS DYTRRGFLDG VGIRLPTICV
RPGKPNKAAS GFFSGIIREP LAGQEAVLPV PDGVRHWHAS PRAAVGFLLH AATIEGARLG
DRRNLTMPGV AVTVAEQIEA LRRVAGEAVV ARIRRVPDPT VERIVAGWPR AFDPRRALDL
GFTAEPDFET IIRVHIEDEL GGRIAA