Gene M446_5979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5979 
Symbol 
ID6131344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6567298 
End bp6567933 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content79% 
IMG OID641646078 
Productglycoside hydrolase family protein 
Protein accessionYP_001772690 
Protein GI170744035 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.234335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0785126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTGT CACCCATCGG CCGCGCGGTC CTGCGGGCGC GCGAAGGCGA GCGGCTGACC 
GCCTACAAGG ACAGCGTGGG CGTCTGGACC ATCGGCGTCG GGATCACCAC GGCCTCCGGG
CTGATCGTGG TCAGGCCCGG GCTGCGCATC ACGCGAGCCG AGAGCGACCG GCTCTTCGCG
CAGGCGGTGG AGCGCTCCGT CGACCCGGTG CGCAGGGCGC TGGCGAAGCC GGTGCCGCAG
GAATTCTTCG ATGCCTGCGC GAGCCTCGCC TACAACATCG GCCCGGTGCG CTTCGCGGAA
TCGACCATCG TCCGCAAGGC CAATGCGGGC GACCTCGCGG GGGCGGCGGA GGCGTTCCTG
CTGTGGAACC GGCCGGCCGC GATCCTGCCG CGGCGGCGGG CGGAGCGCGA CCAGGCGCGG
ACGCCCTACG CGCGGGCCCT GCCGAGGGCG CGCGCCGGCG ACGCGGCGCC GGTGCGGGTG
CCGGCCGGGC CGCCGCCCGG GCCCGCGCCG CGGCCGCCCG ACCCGATGGC GCCGCTCACC
CGCCCGGGAC CGGCCCGGCC CGCCCCCTGC GGCGGGCCTT CCGCTGCCGG CCGGGCCGCA
CCGGCGTCCT CGGGCCGGAC GCTCGCGCGG GGCTGA
 
Protein sequence
MDLSPIGRAV LRAREGERLT AYKDSVGVWT IGVGITTASG LIVVRPGLRI TRAESDRLFA 
QAVERSVDPV RRALAKPVPQ EFFDACASLA YNIGPVRFAE STIVRKANAG DLAGAAEAFL
LWNRPAAILP RRRAERDQAR TPYARALPRA RAGDAAPVRV PAGPPPGPAP RPPDPMAPLT
RPGPARPAPC GGPSAAGRAA PASSGRTLAR G