Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5979 |
Symbol | |
ID | 6131344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 6567298 |
End bp | 6567933 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 641646078 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001772690 |
Protein GI | 170744035 |
COG category | [R] General function prediction only |
COG ID | [COG3772] Phage-related lysozyme (muraminidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.234335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0785126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTGT CACCCATCGG CCGCGCGGTC CTGCGGGCGC GCGAAGGCGA GCGGCTGACC GCCTACAAGG ACAGCGTGGG CGTCTGGACC ATCGGCGTCG GGATCACCAC GGCCTCCGGG CTGATCGTGG TCAGGCCCGG GCTGCGCATC ACGCGAGCCG AGAGCGACCG GCTCTTCGCG CAGGCGGTGG AGCGCTCCGT CGACCCGGTG CGCAGGGCGC TGGCGAAGCC GGTGCCGCAG GAATTCTTCG ATGCCTGCGC GAGCCTCGCC TACAACATCG GCCCGGTGCG CTTCGCGGAA TCGACCATCG TCCGCAAGGC CAATGCGGGC GACCTCGCGG GGGCGGCGGA GGCGTTCCTG CTGTGGAACC GGCCGGCCGC GATCCTGCCG CGGCGGCGGG CGGAGCGCGA CCAGGCGCGG ACGCCCTACG CGCGGGCCCT GCCGAGGGCG CGCGCCGGCG ACGCGGCGCC GGTGCGGGTG CCGGCCGGGC CGCCGCCCGG GCCCGCGCCG CGGCCGCCCG ACCCGATGGC GCCGCTCACC CGCCCGGGAC CGGCCCGGCC CGCCCCCTGC GGCGGGCCTT CCGCTGCCGG CCGGGCCGCA CCGGCGTCCT CGGGCCGGAC GCTCGCGCGG GGCTGA
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Protein sequence | MDLSPIGRAV LRAREGERLT AYKDSVGVWT IGVGITTASG LIVVRPGLRI TRAESDRLFA QAVERSVDPV RRALAKPVPQ EFFDACASLA YNIGPVRFAE STIVRKANAG DLAGAAEAFL LWNRPAAILP RRRAERDQAR TPYARALPRA RAGDAAPVRV PAGPPPGPAP RPPDPMAPLT RPGPARPAPC GGPSAAGRAA PASSGRTLAR G
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