Gene M446_5942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5942 
Symbol 
ID6132494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6532628 
End bp6532882 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content60% 
IMG OID641646044 
ProductRNA chaperone Hfq 
Protein accessionYP_001772656 
Protein GI170744001 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.368334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.120235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG AGCGCGCTCA GAATCTGCAG GACACTTTCC TCAATCACGT CCGCAAGAAC 
AAGATCCCTC TCACGATCTT CCTGGTCAAC GGCGTCAAGC TGCAGGGCGT GGTGACTTGG
TTCGACAATT TCTGCGTGCT GCTGCGGCGG GATGGACATT CGCAGCTGGT CTATAAGCAC
GCGATCTCGA CGATCATGCC CGGTCATCCG GTGCAGCTCT TCGAGCAGGG CGAGGAGGGC
GCCGAGAAGG GCTGA
 
Protein sequence
MAGERAQNLQ DTFLNHVRKN KIPLTIFLVN GVKLQGVVTW FDNFCVLLRR DGHSQLVYKH 
AISTIMPGHP VQLFEQGEEG AEKG