Gene M446_5939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5939 
Symbol 
ID6132491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6527453 
End bp6528376 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content74% 
IMG OID641646041 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001772653 
Protein GI170743998 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.783769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.572405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCC GGAGCTCCGA TCCGCTCTCC GGACCCACCG GGAGAGCCCT GCTGCCGGAG 
GACGCGCAGC TCGCGGAATT CGAGGCGCAG CGCCCGCGCC TGCTGCGCCT CGGCTACCGC
ATGCTCGGTG CGCTGAGCGA GGCCGAGGAC GTGGTGCAGG AGGCGTGGCT GCGCTGGTCG
GGCGTGCGGG ACGGCGTCGC GACGCCGGCC GCCTACCTCA CGCGCATCGT GACGCGGCTG
TGCCTCGATC AGCTGAAATC GGCGCGGGCC CGGCGCGAGA CCTATGTCGG TGCCTGGCTT
CCCGAGCCGC TGATGGGCGC GGCCGATCCG GACGAGACGG TCGGCGAGGA CGTCACGCTG
ACGCTCATGC TGGCGCTCGA GCGGCTGTCG CCGCTCGAGC GGGCGGCCTT CCTCCTCCAC
GACGTGTTCG GCGTCGCGCT GCCCGAAGTG GCCGCGACGC TCGACCGCGC GCCGGCCGCC
GTGCGTCAGC TCGCGGTGCG GGCCCGCAGG CATGTCCAGT CCGGCCGTCA GCGCTACCGC
GTCGACGCCG CGGAAGCCGA GCGCATCGCG CGCGCCTTCT TCGCCGCCTC GCGCGACGGC
GACACGGCGG CGCTCGCCTC GCTGCTGGCC GCCGATGTCG AACTTCGCTC GGACGGCGGC
GGCCGCGTCC TCGCCTATCC CAACGTGATC CGCGGCGCGG ACCGGGTGAT CCGGCTCTTC
GCCGGCCTCT CGGGCAAGGC CTATTTCCAA CCCGTTCTCC TCAAGGTTGC GATCATCGAC
GGATTGCCCG GGTACGTCAG CGCCACGCGC GGCGGCCTGC TCCAGACGAC GGCCCTCTCC
GTCCGCGACG GGCGCGTCGC CGCCATCTAC GCGGTCCGCA ATCCCGACAA GCTCCGCCAG
GTCGCCGCTG CGCTCGGCCG GTGA
 
Protein sequence
MTPRSSDPLS GPTGRALLPE DAQLAEFEAQ RPRLLRLGYR MLGALSEAED VVQEAWLRWS 
GVRDGVATPA AYLTRIVTRL CLDQLKSARA RRETYVGAWL PEPLMGAADP DETVGEDVTL
TLMLALERLS PLERAAFLLH DVFGVALPEV AATLDRAPAA VRQLAVRARR HVQSGRQRYR
VDAAEAERIA RAFFAASRDG DTAALASLLA ADVELRSDGG GRVLAYPNVI RGADRVIRLF
AGLSGKAYFQ PVLLKVAIID GLPGYVSATR GGLLQTTALS VRDGRVAAIY AVRNPDKLRQ
VAAALGR