Gene M446_5901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5901 
Symbol 
ID6133633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6489452 
End bp6490888 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content70% 
IMG OID641646008 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_001772620 
Protein GI170743965 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GCTACGACGT CCTCATCATC GGCGCCGGCC CCGGCGGCTA CGTGACCGCG 
ATCCGCGCGG CCCAGCTCGG CTTCAGGACG GCGGTGGTCG ACCGCGAGCA TCTCGGCGGG
ATCTGCCTGA ACTGGGGCTG CATCCCCACC AAGGCGCTGC TGCGCTCGGC CGAGATCTTC
CACTACATGC AGCACGCCAA GGATTACGGC CTCTCGGCGG AGAAGATCGG GTTCGACGCC
GCGGCGATCG TCAAGCGCTC GCGGGGCGTC TCGGCGCGGC TCAACGGCGG CGTCGGCATG
CTGCTCAAGA AGAACAAGGT CGACGTGATC TGGGGCGAGG CGCGGATCGA GGCGGCGCCG
AAGGGCGACG CGCCGGGCCG GGTCGCGGTC GCCGCGTCGC AGCGGGCCGA GGCGCCGAAG
GGGGCCAAGG GGCCGGGCGC CTACGCGGCG CGGCACATCA TCGTGGCGAC CGGTGCGCGG
CCCCGCGTGC TGCCGGGGAT CGAGCCCGAC AAGCGCCAGA TCTGGACCTA CTACGAGGCG
ATGGTGCCGG AGGCGATGCC CAGGAGCCTG CTCGTCATGG GCTCGGGCGC GATCGGGATC
GAGTTCGCCT CCTTCTACCG GACCATGGGC GCCGAGGTGA CGGTGGTGGA GCTGCTGCCG
CAGATCCTGC CGGTGGAGGA TGCGGAGATC GCCGGGATCG CCCGCAAGCG CTTCGAGAAG
CAGGGCATCC GAATCCTGAC CGGCGCCAAG GTCACGAAGG TGGAGAAGGG CTGGGACGCG
GTCACCGCCA CGGTCGAGGC CGACGGCAAG AGCCAGGCGA TCACGGCCGA GACGCTGATC
TCGGCGGTCG GCGTCGTCGG CAACATCGAG AATCTCGGGC TCGAAGGACT CGGCGTGCGG
ACCGACCGCG GCATCGTGGT GACGGACGGG CTCGGGCGCA CCAACGTGGC GGGGATCTAC
GCCATCGGCG ACGTGGCCGG CCCGCCGATG CTGGCCCACA AGGCCGAGCA CGAGGGCGTG
CTCTGCGTCG AGACCATCAA GGGCCTGCCG ACCCACCCGA TGGACAAGGG CAAGATCCCG
GGCTGCACCT ATTGCCAGCC GCAGATCGCC TCGGTCGGCC TCACCGAGGC CAAGGCGCGG
GAGCAGGGAT TCGACATCCG GGTCGGCCGC TTCCCCTTCC TGGGCAACGG CAAGGCGATC
GCCCTCGGCG AGCCGGACGG CCTCGTGAAG ACGATCTTCG ACAAGAAGAC CGGCCAGCTC
CTCGGCGCCC ACATGGTCGG GGCCGAGGTG ACCGAGCTGA TCCAGGGCTA CGTCGTGGCG
ATGCAGCTCG AGACCACCGA GGAGGACCTG ATGCACACGG TCTTCCCGCA CCCGACCCTG
TCCGAGATGA TGCACGAGAG CGTGCTCGAC GCCTACGGGC GGGTGATCCA CGTGTAG
 
Protein sequence
MSDSYDVLII GAGPGGYVTA IRAAQLGFRT AVVDREHLGG ICLNWGCIPT KALLRSAEIF 
HYMQHAKDYG LSAEKIGFDA AAIVKRSRGV SARLNGGVGM LLKKNKVDVI WGEARIEAAP
KGDAPGRVAV AASQRAEAPK GAKGPGAYAA RHIIVATGAR PRVLPGIEPD KRQIWTYYEA
MVPEAMPRSL LVMGSGAIGI EFASFYRTMG AEVTVVELLP QILPVEDAEI AGIARKRFEK
QGIRILTGAK VTKVEKGWDA VTATVEADGK SQAITAETLI SAVGVVGNIE NLGLEGLGVR
TDRGIVVTDG LGRTNVAGIY AIGDVAGPPM LAHKAEHEGV LCVETIKGLP THPMDKGKIP
GCTYCQPQIA SVGLTEAKAR EQGFDIRVGR FPFLGNGKAI ALGEPDGLVK TIFDKKTGQL
LGAHMVGAEV TELIQGYVVA MQLETTEEDL MHTVFPHPTL SEMMHESVLD AYGRVIHV