| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5802 |
|---|
| Symbol | |
|---|
| ID | 6130991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6376376 |
|---|
| End bp | 6377260 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641645909 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
|---|
| Protein accession | YP_001772523 |
|---|
| Protein GI | 170743868 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0124622 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGG TACGCTACGG CGAGAGCGGC GCGGAGAAGC CCGGCCTCGT CGGCCCCGAC
GGGACCATCC GCGACCTCTC GGGCGTGATC CGCGACATCG CCGGACCGGT GCTCGGGGCC
GAGAGCCTCG GGCGCCTGCG GGCGCTCGAC CCGGCGAGGC TGCCGGCGGT GCCGGCGGGC
ACGCGCCTCG GGCCCTGCGT GGGCGGCGTG CGCAACTTCA TCGCGATCGG GCTCAACTAC
GCGGACCATG CGGCGGAGAC GAACGCGCCG ATCCCCTCCG AGCCGATCAT CTTCAACAAG
GCGCCGTCCT GCATCGTCGG CCCGAACGAC GACGTGATCC TGCCGAAGGC CTCGGCGAAG
ACCGACTGGG AGGTGGAGCT CGCGATCGTG ATCGGCAAGC GCGCCTCCTA CGTCCACGCC
AACGAGGCCC TCGACTACGT GGCGGGGTAC TGCGTCTGCA ACGACGTCTC GGAGCGGGAA
TTCCAGCTGG AGCGCGGCGG CACCTGGACC AAGGGCAAGG GCTGCCCGAC CTTCGGCCCC
CTCGGCCCCT GGCTGGTGAC GCCGGACGAG ATCCCGGACG TCCAGAACCT GGGCATGTGG
CTCGACGTGA ACGGCGCGCG GATGCAGACC GGCTCGACGC GCACGATGAT CTTCGACTGC
CGCCAGATCG TCTCCTACCT GTCGCACTTC ATGCTGCTGG AGCCGGGCGA CGTCATCACC
ACCGGCACGC CGCCGGGGGT CGGGCTCGGG ATGAAGCCGC CGCGCTACCT GAAGGCGGGC
GACGTGGTGA GCCTCGGCAT CGAGGGATTG GGCGAGCAGC GCCAGACCGT GATCGCCTTC
GACGACTGGA CCGCCAAGGT GGCGGCGGGC GAGCCGACGA ACTGA
|
|---|
| Protein sequence | MRLVRYGESG AEKPGLVGPD GTIRDLSGVI RDIAGPVLGA ESLGRLRALD PARLPAVPAG
TRLGPCVGGV RNFIAIGLNY ADHAAETNAP IPSEPIIFNK APSCIVGPND DVILPKASAK
TDWEVELAIV IGKRASYVHA NEALDYVAGY CVCNDVSERE FQLERGGTWT KGKGCPTFGP
LGPWLVTPDE IPDVQNLGMW LDVNGARMQT GSTRTMIFDC RQIVSYLSHF MLLEPGDVIT
TGTPPGVGLG MKPPRYLKAG DVVSLGIEGL GEQRQTVIAF DDWTAKVAAG EPTN
|
|---|
| |