Gene M446_5736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5736 
Symbol 
ID6135856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6298878 
End bp6300221 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content69% 
IMG OID641645845 
Productgeneral substrate transporter 
Protein accessionYP_001772459 
Protein GI170743804 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0108237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATAG ATCAGGTTCA GGGTGCGCCG CCCTCCTCCG GGCCGCTCGA GCGCGACGCC 
CGCCTGGTGT CCAGCGACCA CAAGGTCTCG CCGAACGAGA TCGCGATCGG CGTCATCATC
GGCCGGGCCG CCGAGTATTT CGATTTCTTC GTGTTCGCGA TCGCCTCGGT GGTGGTCTTC
CCCAAGGTCT TCTTCCCCTT CGCGGAGCCG CTGACGGCGA CGCTCTACGC CTTCGCGATG
TTCTCGCTGG CCTTCATCGC GCGACCGATC GGCTCGGTGA TCTTCACCGC CATCGACCGG
CGCCACGGCC GCGGCGTCAA GCTGACGGCC GCGCTGTTCC TGCTCGGCTT CTCCACGATG
GCGATCTCGT TCCTGCCGAG CTACGAGCAA ATCGGCCCCT GGTCCCTCTA CCTCCTCGGG
ATCCTGCGGT TCGGGCAGGG CCTCGCCCTC GGCGGCGCCT GGGACGGGCT CGCCTCGCTC
CTCGCCCTCA ACGCCCCGAT CGAGCGCCGC GGCTTCTACG CGGCGCTGCC CCAGCTCGGC
GCGCCGATCG GCTTCATCGT GGCGAGCGTG CTGTTCGCCT TCTTCCTGCT CAACCTCTCG
GAGGGCGACT TCATCGACTG GGGCTGGCGC TACCCGTTCT TCTGCGCCTT CGCCATCAAC
GTGGTGGCGC TGTTCTCGCG GCTGCGGCTG GTGGCGACCG AGGAATTCGC GAACCTGTTG
GAGCGGCGCA GGCTCGAACC CTCGCCGATC CTCCCGCTGA TCCGCAGCCA CGCGCGCGAA
TTGCTCATCG GCGCGCTGAT CCCGCTCGCG AGCTTCGCGC TGTTCCACCT CGTCACGGTC
TTTCCGATCA GCTGGATCAC GCTGTTCACC CAGCGCTCGG CGGGCGAGTT CCTGATGGTG
CAGTGCTCGG GCGCCTTCAT CTGCGCCGGC GCGGTGCTGG CCTCGGGCCT GATCGCCGAC
CAGATCGGCC GGCGCAGGCT CCTGATCCTC TCGGCCGGCC TGATCGCGAT CTTCGCCATC
GGCAGCACCA TCGCGCCCCT GCTCGTCGAG GAGAACGCGA TCGGCCAGAC CATCTACGTG
AATGCCGGCT TCGCCCTGCT CGGCCTGTCC TACGGGCAAT CCTCCGGCGC CGTGACCGCG
CGGCTGGAGC AGCGCTACCG CTACACGGGC GCGGCGCTCA CCAACGACCT CGCCTGGCTG
CTCGGGGCCG GCTTCGCGCC GCTGATCGTC CTGTTCCTGT CGGCGCGCTA CGGGCTCGCC
TGCGTCGGCC TCTACCTCCT GTCGGGGGCG GTCACCACCC TGCTGGTGCT CACCCTCTCC
CGGTCGGAGA TCCGGCAGGT CTGA
 
Protein sequence
MAIDQVQGAP PSSGPLERDA RLVSSDHKVS PNEIAIGVII GRAAEYFDFF VFAIASVVVF 
PKVFFPFAEP LTATLYAFAM FSLAFIARPI GSVIFTAIDR RHGRGVKLTA ALFLLGFSTM
AISFLPSYEQ IGPWSLYLLG ILRFGQGLAL GGAWDGLASL LALNAPIERR GFYAALPQLG
APIGFIVASV LFAFFLLNLS EGDFIDWGWR YPFFCAFAIN VVALFSRLRL VATEEFANLL
ERRRLEPSPI LPLIRSHARE LLIGALIPLA SFALFHLVTV FPISWITLFT QRSAGEFLMV
QCSGAFICAG AVLASGLIAD QIGRRRLLIL SAGLIAIFAI GSTIAPLLVE ENAIGQTIYV
NAGFALLGLS YGQSSGAVTA RLEQRYRYTG AALTNDLAWL LGAGFAPLIV LFLSARYGLA
CVGLYLLSGA VTTLLVLTLS RSEIRQV