| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5720 |
|---|
| Symbol | |
|---|
| ID | 6135780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6277612 |
|---|
| End bp | 6278415 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641645829 |
|---|
| Product | Crp/FNR family transcriptional regulator |
|---|
| Protein accession | YP_001772443 |
|---|
| Protein GI | 170743788 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.336903 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00164993 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTCT GGCGAGAGAG CGCGTGGGCG TGCCGCGTGA CTGACGAGGG GGCAGAGGCG
CGTCCCGAGG CGCTCACCAC GCCGAACCTG CTGCTGGCGG CCCTGCCCGA GGCCGAGTGG
GCCCTCATCC GTCCCCACCT CCAGCGGGTT CCCCTGCGCC GCAAGCAGGT GCTGGAGGAG
CCGCGGACGG AGATCCAGCA CGTCTACTTC ATCGAGCGGG GTCTCGCCTC CGTGCAGGCC
AGGACCCAGG CCGACGGTGC GCACGGGGTC GGCCTCGTCG GCCGCTTCGG CATGACCGGG
CTCGGCATCC TGCTCGGGAC CCGGCGCGCC ACGCTGCGTG TCTCGGTCCA GGTTCCGGGC
TCGGCGCTGC GCCTGGGCGC CGAGGAGGCG GCGCGGCTCA TGGAGGCGAG CGCCACCCTG
CGCCGGACCG GTCTCAGCTA CATCCAGGCG CTGATGACCC AGTCGGCCCA GCTCAGCCTG
TGCAACGCGC GCCACCCGAT GAAGCACCGC GTCCGGCGCT GGCTGCTCCT GGCGCGGGAC
TGGCTCGGCG AGGACGAGGT CTGCGTCAGC CACCAGCTGA TCGCCGACCT GCTCGGGGTG
CGGCGCGCCA GCGTCAGCGA GCAGATCGAG TGCCTGGAGA GCGAGGGCAT CGTCAGCCAG
AGGCGGGCCT GCATCACGCT GCGCGACCGG GCCGCCCTCG AAGCGGATTG CTGCGAGTGT
CACCGCCTCG TGCGCGCGGA GTACAGGCGG CTGAACCTCC TCGGGGCCGA GCGGGCGGCC
GAGCGGGCGG CCGAGGACCG GTAG
|
|---|
| Protein sequence | MDVWRESAWA CRVTDEGAEA RPEALTTPNL LLAALPEAEW ALIRPHLQRV PLRRKQVLEE
PRTEIQHVYF IERGLASVQA RTQADGAHGV GLVGRFGMTG LGILLGTRRA TLRVSVQVPG
SALRLGAEEA ARLMEASATL RRTGLSYIQA LMTQSAQLSL CNARHPMKHR VRRWLLLARD
WLGEDEVCVS HQLIADLLGV RRASVSEQIE CLESEGIVSQ RRACITLRDR AALEADCCEC
HRLVRAEYRR LNLLGAERAA ERAAEDR
|
|---|
| |