Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5695 |
Symbol | |
ID | 6132529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 6248950 |
End bp | 6249822 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641645806 |
Product | inner-membrane translocator |
Protein accession | YP_001772420 |
Protein GI | 170743765 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00418313 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACCAGC TGCTCCAGCA CCTCGTCAAC ACCCTGATCC TGGGCGGGAC CTACGCGCTG CTCGGCGTCG GGCTCACGCT GATCTTCGGG ATCATGAACG TCGTGAACTT CACGCACGGC GCGCTCTACA CCGTCGGCGC GTACCTGATG TACCTCGCGG TCGCGGCGCT CGGGCTCAAC TTCTTCCTGG CGCTGCCGGC GGCCATCCTC GGCGGCCTCG CGCTCGGCGC CGTGATCGAG CTCCTGCTGC TCCGGCCGCT GCGGGGCCAG GACATCGACA CGACCATGCT GGTGATGATC GGGGCCGGCA TCGTGCTGCA ATCGGGCACC CTCTGGACCT TCGGCGGCGT CGCCAAGGCG GTGCCCTCGC CCTTCCCCGA GGCGCCGCTG CGGCTCGGGC CGGTCTCGGT CTCGTGGCTG AGCCTGTTCG TGCTCGGCGG CGCGCTGCTC CTGATCGGGC TCACCTACGC GCTGATCAAC CGCACGAGGC TCGGCCTCGC CATGCGCGCC GCCTTCCAGG ATTCCGACAC GGCGGCGCTG ATGGGCGTCG ACGTGCGGGG GATCTACACC GCGACCTTCG CGCTCGGCTC CTCGCTCGCC GCCGCCGCCG GGGCGCTGCT CGGCCCGGTC TACGTGGTGT TCCCGCAGAT GGGGCAGCTC GCCGAGCTGA AGGCCTTCGC GATCGTGATC CTGGGCGGGC TCGGCAACGT CACGGGGGCG GCGATCGGCG GCTTCATCCT GGCGCTCGCG GAGGAGCTCG GGGCCGGCTA CGTCTCGTCG GGCTACCGCG ACGCGATGGG CTTCCTGATC ATCATCGCGG TCCTGCTCTG GCGGCCGACC GGGCTGTTCG CGAAAGCGGA GCGCATCGGA TGA
|
Protein sequence | MDQLLQHLVN TLILGGTYAL LGVGLTLIFG IMNVVNFTHG ALYTVGAYLM YLAVAALGLN FFLALPAAIL GGLALGAVIE LLLLRPLRGQ DIDTTMLVMI GAGIVLQSGT LWTFGGVAKA VPSPFPEAPL RLGPVSVSWL SLFVLGGALL LIGLTYALIN RTRLGLAMRA AFQDSDTAAL MGVDVRGIYT ATFALGSSLA AAAGALLGPV YVVFPQMGQL AELKAFAIVI LGGLGNVTGA AIGGFILALA EELGAGYVSS GYRDAMGFLI IIAVLLWRPT GLFAKAERIG
|
| |