| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5663 |
|---|
| Symbol | |
|---|
| ID | 6133737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6215001 |
|---|
| End bp | 6216560 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641645776 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001772390 |
|---|
| Protein GI | 170743735 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.170475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCATTC TCGACGTGCC GCTGCTCGCG CCCGCGGCGC TGCTCGCCTG CGCCGCCGCC
TGCTTCTCGA ACCGGGAGCG GCGCCCGCAT GTCGTCCTCC GGCTCGCCGA GGGAGCGACC
CTCGTTGCCC TCGCGGTCGC AATCGTCTCG GCGGCCGTGC TGGCGATGGC GGGGCCCGGT
GCGGGCTCCC TGGTCGGGCT GCACGGAATC GGCCTCTCGG TCCGACTGGA TGCGGTCAGC
ATCACCATGC TCCTGCTGGT GACCTTCATC GGCTGGATCG TGGTGCGCTA CGCGTCGCGT
TACCTCGACG GCGAGGAGCG CCAGGGCCTC TTCACCGGCT GGCTCTGCCT CACGCTCGCC
TCGGTGCTGC TGCTCGTCAC GGCCGGCAAC CTCGCCCAAC TGGTCGCGGC GTGGATCGCG
ACCAGCCTGT TCCTGCACCG CCTCCTGCTC TTCTACGGCG AACGCCCGGC CGCTCGGCGG
GCGGCGCGCA AGAAGTTCAT CACCGCGCGC CTCGGCGATG CCGCCCTGAT CGCCGCGGCG
GGTCTGCTCG CCGCGGCCTA CGGCACCGGC GACCTCGGCC GGATCCTGGG CGCGGCCCGC
GCCGGAGAGG GCGGCGGGCT GGCCGTCGCG GCCGCCGGCC TGCTCGCGCT CGCCGCCATG
CTCAAGTCGG CCCAGTTCCC CACGCACGGG TGGCTGACCG AGGTCATGGA GACGCCGACC
CCCGTCTCGG CGCTGCTCCA CGCCGGCGTG ATCAACGCGG GCGGGTTCCT GCTGATCCGC
TTCGCGGACG TGCTCCTCCT CGCCCCCGGG GTGCTCGCGG TTCTCGTGAT GGTCGGCGGC
TTCACGGCCC TGTTCGGGGG CTTGGTGATG CTGACCCAGC CCGCCGTGAA GACCTCGCTG
GCGTGGTCCA CCGTCGCCCA GATGGGCTTC ATGACTTTCG AATGCGGGCT GGCCCTGTTC
CCGCTCGCGC TGCTGCACAT CGTGGCGCAC TCGCTCTACA AGGCCCACGC CTTCCTGGCC
TCGGGCGGCG CCGTCGAGGC GGTCGCAGCC ATTCGCCGCC CGGGGCCGGT CGCCGTCCCG
GGCGCCGTCG CCGTCGGCCG CGCCTTCCTG TCCGCCCTCA TCATCTTCGT GCTGGTCGGC
CTCGGGTTCG GGCTGGCGCA CAAGTCGCCC CAGGCCCTCG CGCTCGGCGC CATCCTGATC
TTCGGCGTCG CCTACATGCT CGCCCAGGGC TTCGCCGACG CCGCGCCCCG GGAGCTGACC
CGGCGCACCG CGGTCTACGC GGTCGCCACC TCGGTCGCCT ACTTCGCGCT GCAGCTGGCC
GCCATCCGCC TCACCGCGGG CGTGCTGCCG CCGACGCCGG CGCCGGGGCC GCTGGAATGG
GCGCTGATCG TGCTCGCCCT GCTCAGCTTC GGGCTGGTCG CGGTCCTGCA GGCGATGTTC
CCGCTCTGGG CCTACCACCC CGCGGCCGCG GGCCTGCGGG TGCACCTCGC CAACGGGCTC
TACGCCAACG CCGCCTTCGA TCGGCTGATC GGTGGCTGGT CCGCGCGCGG CGCCTCCTGA
|
|---|
| Protein sequence | MPILDVPLLA PAALLACAAA CFSNRERRPH VVLRLAEGAT LVALAVAIVS AAVLAMAGPG
AGSLVGLHGI GLSVRLDAVS ITMLLLVTFI GWIVVRYASR YLDGEERQGL FTGWLCLTLA
SVLLLVTAGN LAQLVAAWIA TSLFLHRLLL FYGERPAARR AARKKFITAR LGDAALIAAA
GLLAAAYGTG DLGRILGAAR AGEGGGLAVA AAGLLALAAM LKSAQFPTHG WLTEVMETPT
PVSALLHAGV INAGGFLLIR FADVLLLAPG VLAVLVMVGG FTALFGGLVM LTQPAVKTSL
AWSTVAQMGF MTFECGLALF PLALLHIVAH SLYKAHAFLA SGGAVEAVAA IRRPGPVAVP
GAVAVGRAFL SALIIFVLVG LGFGLAHKSP QALALGAILI FGVAYMLAQG FADAAPRELT
RRTAVYAVAT SVAYFALQLA AIRLTAGVLP PTPAPGPLEW ALIVLALLSF GLVAVLQAMF
PLWAYHPAAA GLRVHLANGL YANAAFDRLI GGWSARGAS
|
|---|
| |