Gene M446_5573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5573 
Symbol 
ID6133383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6110790 
End bp6111980 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content55% 
IMG OID641645700 
Productbranched chain amino acid ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001772314 
Protein GI170743659 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCT TCGCCGCTAC CTTCGCTCTC GCATGTCTCA CATGTTCCAG CGCTGGAGCG 
GGCGAAGCAC CGGTTAAGAT CGGCCTGCTG ACCGACATGT CCGGCGTGTT CGCAGACGCT
GACGGCCCGG GCGGAGCCGA GGCCGTGAAG ATGGCCATCG AGGATTTTGG CGGGGAGGTC
CTCGGGCAGA AGATCACCTT TTTCTCAGCC GATCACCAGA ACAAGCCGGA TATCGGCGCT
GCGAAGGCGC GCGAGTGGTT CGACCGAGAT GGTATCACTA TGGTGCTAGC AGGCCCGAAC
TCGTCTGTTG CACTTGCCGT CAACGCGATT TCACGTGACA AGAAACGCAT TTTCATGCCG
ATTGGTGCAA CCACGTCGCG CCTATCGAAT GAGGACTGCA CGCCGTACAC CGTACAATAC
GCCTACGACA CAATTGCCCT CTCGAAAGGG ACAGGTTCAG CCGTCCTCAA GCAAGGCGGA
AAATCCTGGT ATTTCGTTAC AGCCGACTTC GCATTTGGCA CGGCAATCGA GAAGGATACG
CGTGATGTTG TTCAGGCTCA GGGTGGAAAG ACCCTCGGCT CTGTCCGCCA TCCGCTCGGC
ACGGCTGATT ACTCGTCGTA CCTGCTTCAG GCTCAAGCCG CAAGACCTGA CGTCTTAGCA
CTGGCGAATG CCGGAACCGA CACGATCAAC TCCATCAAGG CTGTCGATGA ATTTGGCCTC
GTCGATCAAA TGAAAGTCGT AGCCATGAAT ATGTATCTCA GTGATGTCCA TGCTCTTGGG
CTTGATGCCG CAAAGGGCAT GTACATGACG GACGGTTGGT ATTGGGATCT TAACGACAAA
ACACGTGCAT GGGCCAAGAG ATTTTTAGCG CGTACTTCCA AGATGCCGAC TCTTGTTCAG
GCCGCCGACT ACTCCGCAGC GTGGCACTAT TTGTCGGCCG TTAAGGCTGC TGGGAGCAGC
GATTCAGATG CGGTGGTCGC TAAGATGCGT GAGATGCCGA TCAATGATTT CTTCGCAACG
GGTGGCCACA TTCGGGCAGA CGGGCGAATG ATACACGAAA TGTATCTCAT GCAAGTCAAG
TCTCCGAGCG AGTCGAAATA TCCGTGGGAT TACTACAAGG TAATTGAGGT TATCCCAGGC
GAACAAGCAG CGTTTACTAA AGAGGAGAGT CGCTGCAATT TGTGGAAGTA A
 
Protein sequence
MQRFAATFAL ACLTCSSAGA GEAPVKIGLL TDMSGVFADA DGPGGAEAVK MAIEDFGGEV 
LGQKITFFSA DHQNKPDIGA AKAREWFDRD GITMVLAGPN SSVALAVNAI SRDKKRIFMP
IGATTSRLSN EDCTPYTVQY AYDTIALSKG TGSAVLKQGG KSWYFVTADF AFGTAIEKDT
RDVVQAQGGK TLGSVRHPLG TADYSSYLLQ AQAARPDVLA LANAGTDTIN SIKAVDEFGL
VDQMKVVAMN MYLSDVHALG LDAAKGMYMT DGWYWDLNDK TRAWAKRFLA RTSKMPTLVQ
AADYSAAWHY LSAVKAAGSS DSDAVVAKMR EMPINDFFAT GGHIRADGRM IHEMYLMQVK
SPSESKYPWD YYKVIEVIPG EQAAFTKEES RCNLWK