| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5543 |
|---|
| Symbol | |
|---|
| ID | 6129986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 6080978 |
|---|
| End bp | 6083212 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641645675 |
|---|
| Product | RecD/TraA family helicase |
|---|
| Protein accession | YP_001772290 |
|---|
| Protein GI | 170743635 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA TGGTCCGGCC CAAGCAGGTC GAGAGGAGCA ACCCCGTCGA GGCTCTCGCG
GGTACGGTCG AGCGCGTCAC CTTCCACTCG CCCGAGACCG GCTTCTGCGT GCTCAAGGTG
CAAGCGCGGG GCAAGCGCGA CCTCGTGCCG GTGGTTGGTC ACGCACCCGC GATCGGCGCG
GGCGAGTGGA TCACCGCCAC CGGCATCTGG ATCACCGACC GCACCCACGG CCTCCAGTTC
AAGGCCGACA CCCTGAAGGC CACGCCGCCC ACCGGGGCTG CAGGCATCGA GAAGTACCTC
GCGTCGGGCC ACATGCGCGG GATCGGCCCC GCTATGGCCA AGCGCATCGT GGCCACCTTC
GGTGAGAATA CCTTCGAGAT CATCGAGGCC GAGCCTGACC GGCTTCGGGA GGTCACCGGC
ATCGGGCCGT GGCGGGCGGC CAAGATCGTA GCCGGCTGGG CCGAGCAGAA GGCCGTGCGT
GAGATCATGA TCTTCCTGCA CGCCCACGGC GTCGGCACGG CCAGGGCAGT GCGCATCTTC
AAGACCTACG GCCATGAGGC TATTCAGGTC ATGACTGAAG ATCCCTACCG GCTCGCGCGC
GACATCCGCG GCATTGGCTT CCGCACCGCC GACGCGATCG CGATGAAGCT CGGGATGGAG
AAGAACGCAC CGCCGCGGCT CCGGGCGGGC GTCTCGTTCG CGCTCCAGAC GGCCATGGAC
GAGGGGCACT GCGCCTTACC CGCCGAGCGC CTGACCGTGC TCGCCCAGAA GCTGCTGGAG
GTCGAACCGG ACCTGATCCG AGCCGCCATC ACTGAGGAGC TTCTGCGCGG CGAGGAGGTG
GTCGCCGACA CGGTCGGGGA GGAGACGTGC GTGTTCCTGA AGGGCCTGCA CGCGGCCGAG
CGCAGCATCG CCGAGCGCCT GATCGCCCGA GCGGCGGGCT CGCCGCCCTG GCCTGAGATC
GACATCGGCA AAGCGCGACC CTGGGTCGAG CAGAAGACCG GCAAGGTGCT CTCCCCTTCT
CAGGCTGAAG CCGTGCGCCT GATGCTCGCC TCCAAGCTCT CGGTCATCAC GGGTGGGCCG
GGCGTGGGGA AGACCAGCAC CCTCGACACG GTGCTGCGCA TCCTGATCGC CAAGGGCGTG
CGCGTTCTCC TCGCCGCTCC GACCGGCCGC GCGGCCAAGC GGATGACTGA GCAGACGGGC
CTGGAGGCAA AGACCATCCA CCGCCTGCTG GAGATCGACC CCAAGCACGG CGGCTTCTCG
CGCAACGAGG AGAACCCGCT GGATTGCGAC CTGCTGGTGA TCGATGAGAC GTCGATGGTG
GACGTGCCGC TCATGAACGC GTTGCTGAAG GCGGTGCCGG AGCGCTCAGG GCTGCTGCTG
GTGGGGGACG TCGATCAGCT ACCCTCGGTC GGGCCGGGGC AGGTGCTGGC AGATGTGATC
GCGTCGGGGC GCGTTCCGGT GGCGCGGCTC ACGGAGGTGT TCCGACAGGC GGCCGAGAGC
CGGATCGTCG TCAATGCGCA CCGGATCAAC GCGGGCAAGA TGCCGGAGCC GCCCAGAGCG
GGCGACGAGG CCGACTTTTA CCTGATCGAG ATCGCCGAGC CCGAGGAGGG CGTGGCGAAG
CTGATCGAGG TGGTGACCCG GCGCATCCCG AAGCGGTTCG GCTTCGACCC GGTTCGCGAC
ATTCAGGTGC TGACGCCCAT GAACCGGGGC GTGCTGGGCG CGCGCAACCT GAACCACGAA
CTCCAGGCGG TGCTGAACCC GAGCCCGCCC GCCATGGTTG AGCGGTTCGG CTGGAAGTTC
GCGCCCGGCG ACCGAGTGAT GGAGACGCAG AACGACTACG ATCGCGAGGT GTTCAACGGC
GACCTCGGCT CGGTGCTGCG CATCGACGAC GATGAAGGAG CGCTGATGGT CGAGTTCGAC
GCGCGCGAGG TGGTCTACCC GTTCGGCGAA CTCGATACGC TGGTACCCGC CTACGCGACC
ACAATCCACA AGAGCCAGGG CTCGGAGTAC CCGGCCGTGG TGATCCCGAT CACCACTCAG
CACTGGACCA TGCTGGCGCG CAACCTGCTC TACACGGGCG TGACGCGCGG CAAGCGCTTG
GTGGTGCTGA TCGGGCAGCG AAAGGCCATC GGCATGGCGG TACGCGGTGG GGCGGCGAAG
CGGCGCTACA CGAAGCTGCG CGAGTGGCTC TCCTGGCCAG CCGTCGAACA GCCGGAACGG
TGCGCGCGAG CATGA
|
|---|
| Protein sequence | MNQMVRPKQV ERSNPVEALA GTVERVTFHS PETGFCVLKV QARGKRDLVP VVGHAPAIGA
GEWITATGIW ITDRTHGLQF KADTLKATPP TGAAGIEKYL ASGHMRGIGP AMAKRIVATF
GENTFEIIEA EPDRLREVTG IGPWRAAKIV AGWAEQKAVR EIMIFLHAHG VGTARAVRIF
KTYGHEAIQV MTEDPYRLAR DIRGIGFRTA DAIAMKLGME KNAPPRLRAG VSFALQTAMD
EGHCALPAER LTVLAQKLLE VEPDLIRAAI TEELLRGEEV VADTVGEETC VFLKGLHAAE
RSIAERLIAR AAGSPPWPEI DIGKARPWVE QKTGKVLSPS QAEAVRLMLA SKLSVITGGP
GVGKTSTLDT VLRILIAKGV RVLLAAPTGR AAKRMTEQTG LEAKTIHRLL EIDPKHGGFS
RNEENPLDCD LLVIDETSMV DVPLMNALLK AVPERSGLLL VGDVDQLPSV GPGQVLADVI
ASGRVPVARL TEVFRQAAES RIVVNAHRIN AGKMPEPPRA GDEADFYLIE IAEPEEGVAK
LIEVVTRRIP KRFGFDPVRD IQVLTPMNRG VLGARNLNHE LQAVLNPSPP AMVERFGWKF
APGDRVMETQ NDYDREVFNG DLGSVLRIDD DEGALMVEFD AREVVYPFGE LDTLVPAYAT
TIHKSQGSEY PAVVIPITTQ HWTMLARNLL YTGVTRGKRL VVLIGQRKAI GMAVRGGAAK
RRYTKLREWL SWPAVEQPER CARA
|
|---|
| |