Gene M446_5527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5527 
Symbol 
ID6129947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6062969 
End bp6064273 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content72% 
IMG OID641645660 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001772275 
Protein GI170743620 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.745168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGC CTTTCCCCAG GCCCTCGGCC GCCTCGCTCT GGGCCGCCCG CGCGGTGCCG 
GCTCAGGATT TCGCGCCGCT CTGCGACGAC GTCCAGGCGG ACGTCGCGGT GGTGGGCGGC
GGCTATACGG GCCTGTCGGC GGCTTTGGCG CTGGCCGAGC GCGGTGAGCG AGCGATCGTC
CTCGAGGCGA GCACCGTCGG GTGGGGCGCG AGCGGTCGCA ACGGCGGCGT GGTCTCGGCG
AAATTTCGCG CCCCCTTCCA AGCGATCGCT GCGGCGCACG GGATCGAGGT GGCGCGGCGC
ATGCACGCCA TCGCGCACGA TTCGGTCGGC ACGCTCGAGC GGATGATCGC CGAGCACGAC
ATCCCGGAGG CTGGTTACGC CCGGGTCGGC CAGCTCAAAT GCGCCCATAC CCCGCAGGCC
CTGGCATCCG CCGTCGCCGA CATGGAGTGG ATGCGCCGGG AGATCGGCGA CGCTTCGGTC
ACGAGGCTCA CGGGCGAGGA AGTGGCGGCC GAGACAGGCT CGCGGGACTT CGTCGGCGGC
GTCCTCTCGG CCCGTGCGGG CGGGCTGCAC CCGCTCAACT ACGCGCGGGG ACTCGCGCGC
GCCGCGCATG CCAGGGGGAT CGCGATCCAC GAGGGCAGCC CCGCCACGGA ACTTCGCCGC
GAGGCGGGCG GAATCCGCGT CGCGACGTCC CGCGGCTCCG TCCGGGCCCG CCAGGTGATC
GTGGCGACCA ACGGCTACTC CGACCTCACC CCCGCGACGG AGCCCCTGCG CACCCGCCTG
GTTCCGTTCC GCAGCGCGAT CCTCGCCACC GAAATCCTCT CGGACAATCT GCGGGCGGCG
ATGCTGCCGA CCCGCCGCAT CTGCGTCGAG ACCCGGCGGA TGATGCGCTG GTTCCGGATG
GTCGACGGCC GAATGGTCTA CGGCGGTCGC GGCGCCTTCG GCCGCCACGA CACCGCGGCG
GCATTCGCGG ACCTGCGCCG GGCGATGGTG CGCACCTTCC CGGCGCTCGC CGACACGCCG
GTGTCCCACC AATGGTCGGG CCTCGTCGCC ATGACCCTCG ATGCGCTGCC GCATGTCGGC
CGCCTAGACG ACCGCGTGAC CTTCGCGATG GGCTACAACG GCGCCGGCGT CGCCATGTCG
ACGCATCTCG GTCGCTACGC CGCCGCCTTC GCGCTCGGCG AATCGCCCGA TGTCGGTCTG
CTCGGCACCC ACGCTTTCCA GCCGCTGCCG TTCTACGGCC TGCGCGAGCC GGTGATACGG
CTCGTCGCGG GCTGGTACCA GTTCCTCGAC GCGATCGGCC GCTGA
 
Protein sequence
MESPFPRPSA ASLWAARAVP AQDFAPLCDD VQADVAVVGG GYTGLSAALA LAERGERAIV 
LEASTVGWGA SGRNGGVVSA KFRAPFQAIA AAHGIEVARR MHAIAHDSVG TLERMIAEHD
IPEAGYARVG QLKCAHTPQA LASAVADMEW MRREIGDASV TRLTGEEVAA ETGSRDFVGG
VLSARAGGLH PLNYARGLAR AAHARGIAIH EGSPATELRR EAGGIRVATS RGSVRARQVI
VATNGYSDLT PATEPLRTRL VPFRSAILAT EILSDNLRAA MLPTRRICVE TRRMMRWFRM
VDGRMVYGGR GAFGRHDTAA AFADLRRAMV RTFPALADTP VSHQWSGLVA MTLDALPHVG
RLDDRVTFAM GYNGAGVAMS THLGRYAAAF ALGESPDVGL LGTHAFQPLP FYGLREPVIR
LVAGWYQFLD AIGR