Gene M446_5522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5522 
Symbol 
ID6129942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6056871 
End bp6057707 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID641645656 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001772271 
Protein GI170743616 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0444426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.294784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCAGC CGGCCTTCCA GCTCAGCATC GCGCGCCTGA GGGACGGTCA GGTCCTGAGG 
GGGTTCCGGG CGTGGCACGT CGCCGTGGTG CTGCTGGCGC TCGTGGTCGC GCTCGCCGCG
GCGGTCGTGC GCTCCTCCGC CCTCGGGACC CCCTCCACGG CGCTGACTGC GCTCATCACC
TACGCTCCGT TCATCCTGCG GGGCTTCGCG CTCAACCTCG CCATGAGCTT CCTCGCTATG
GCGATCGCGA CGATCCTTGG GATCGGCCTC GGCCTCATGC AGATCAGCAC GAGGGCGGCC
GTCCGGCTGC CGGCCCGTTT CGTCACGCAC CTCCTGCGCA ACTCGCCATG GCTGGTGATC
CTGTTCCTGG TGACCTACTT CATGCCCGTC GAGGTCCGGC TGCCGGGCGG ATGGCTGGTC
CCCGTTCCGG ACTGGAGCAA GGCCACCCTG GCCTTCGCGC TGCCGGTCAT GGGCAATATC
AGCGAGATCC TGCGCGGCGC GGTGCGGTCG ATCCCGTCGG GGCAGTGGGA ATCGGCCGAG
GGGCTGGCCT TCACCCGCGC GCAGACCCTG CGCTACATCA TCCTGCCGCA ATGCGTCCGC
CGCTGCATCC CGCCCTGGAT GAACTGGTAC GCCATGCTGA CATTGTCGAC GCCGATGGCG
TCGATCTTCA GCGTGCACGA GGCGGTCGCG AACGCCCAGG CGAGCATGGA GGCGGCAGGC
GCCCGCCCGG AGCTTCTGCT TCCGTTCTAC CTGTTCTTGC TGTGTCTGTT CTTCGTCTAC
ATCTACCCGA TCGCGGTGTG GACGCGCGTG CTGGAGCGCC GATATGCTGT TGGCTGA
 
Protein sequence
MRQPAFQLSI ARLRDGQVLR GFRAWHVAVV LLALVVALAA AVVRSSALGT PSTALTALIT 
YAPFILRGFA LNLAMSFLAM AIATILGIGL GLMQISTRAA VRLPARFVTH LLRNSPWLVI
LFLVTYFMPV EVRLPGGWLV PVPDWSKATL AFALPVMGNI SEILRGAVRS IPSGQWESAE
GLAFTRAQTL RYIILPQCVR RCIPPWMNWY AMLTLSTPMA SIFSVHEAVA NAQASMEAAG
ARPELLLPFY LFLLCLFFVY IYPIAVWTRV LERRYAVG