Gene M446_5500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5500 
Symbol 
ID6135796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6030911 
End bp6031780 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content73% 
IMG OID641645634 
Productacyl-CoA thioesterase II 
Protein accessionYP_001772250 
Protein GI170743595 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.215107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.231558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTG CGGTCGACGA CCTCCTCGCC CTCCTCGATC TGGAGCAGCT GGAGCAGAAC 
CTGTTTCGCG GCCGCTCGCC CAAGGACCGC TGGCAGCGCG TCTTCGGCGG TCAGGTGATC
GGGCAGGCCC TCGTGGCGGC GACCCGCACG GTGCCGGCCG AGCGCCGGCC CCACTCGCTC
CACGCCTATT TCCTGCTCGG CGGCGACCCG CGCGTGCCGA TCATCTACGA GGTCGACCGC
ATCCGCGACG GGCGCAGCTT CACCACGCGG CGCGTCAACG CGATCCAGCA CGGCCGCCCG
ATCTTCTCGA TGTCGGCCTC CTTCCACCTG GAGGAGCCGG GCTTCGACCA CCAGCTGCCG
ATGCCGGACG TGCCCATGCC CGAGGCCCTC GGCGACGAGA GCAGCCTGAA GGCCACGATC
ATGCCGGGCA TGCCCGATCC GGTCCGGGCC TATTTCGAGC GCGAGCGCCC GATCGAGCTG
CGGCCCGTCG AGTTCGAGCG CTACGCCGCG CCCGCCCCGC GCGCGCCGCG CTTCCACGTC
TGGATCCGCG CCACCGGCCC GCTGCCCGAC GACCCGGCCG TGCACCAGAG CGTGCTCGCC
TACGCCTCCG ACATGACGCT GCTCGACACC TCGCTCGTCG CCCACGGGCG GACCGTCTTC
GAGCGCACGA TCCAGCCCGC GAGCCTCGAC CACGCGCTGT GGTTCCACCG GCCGTTCCGC
GCCGACGAGT GGCTGCTCTA CGCCCAGGAC AGCCCGAGCG CCTCGGGCGC CTGCGGCTTC
GCCCGCGGGC TGATCTTCAC CCGCGACGGC ACCCTGGTCG CCTCCGTGGC CCAGGAGGGC
ATGATCCGCC CGGTCCGCGA GGAGGCCTGA
 
Protein sequence
MTRAVDDLLA LLDLEQLEQN LFRGRSPKDR WQRVFGGQVI GQALVAATRT VPAERRPHSL 
HAYFLLGGDP RVPIIYEVDR IRDGRSFTTR RVNAIQHGRP IFSMSASFHL EEPGFDHQLP
MPDVPMPEAL GDESSLKATI MPGMPDPVRA YFERERPIEL RPVEFERYAA PAPRAPRFHV
WIRATGPLPD DPAVHQSVLA YASDMTLLDT SLVAHGRTVF ERTIQPASLD HALWFHRPFR
ADEWLLYAQD SPSASGACGF ARGLIFTRDG TLVASVAQEG MIRPVREEA