Gene M446_5472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5472 
Symbol 
ID6131825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp6004504 
End bp6005046 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content76% 
IMG OID641645606 
Product2'-5' RNA ligase 
Protein accessionYP_001772222 
Protein GI170743567 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0586972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCC TGTTCACCGG CCTCGAGATC CCGCCCGAGA CGGGCGCGGC GCTCAGCCGC 
CACCGCTTCG GCCTGCCGGG CGCCCGCTGG GTCGAGCCCG CCGACTACCA CATCACCCTG
CGCTTCATCG GCGACGTGGA CGGGGGGCTC GCCGAGGAGA TCGCCGAGGG CTTGGGCGAG
ACCCGCCCGC GCGGGGCGCT CCCCGTCGTC CTCGACGGGC TCGCGAGCTT CGGGGGCGAC
CGGCCGCATT CCGTCCACGC CCGGGTCGCG CCCTCGCCGG CCCTCGACGA GGTCCGGGCC
GAGCAGGAGC GGCTGATGCG CCGCCTCGGC CTCAAGCCCG AGACGCGGCG CTTCACGCCC
CACGTCACCC TGGCGCGGCT GCGCCGGCAG GCGACCCGCG AGGGGGTGGC GCAGTACCTC
GCCGAGCAGG GCGTCTTCGC GCCGCTCGCC TTCACGGCGG AGCGGGTCGT GCTCTACTCG
TCGCGGGACT CGGTGGGGGG TGGGCCCTAC GTGGTCGAGG CCGCCTATCC GCTGGAGGCG
TGA
 
Protein sequence
MPRLFTGLEI PPETGAALSR HRFGLPGARW VEPADYHITL RFIGDVDGGL AEEIAEGLGE 
TRPRGALPVV LDGLASFGGD RPHSVHARVA PSPALDEVRA EQERLMRRLG LKPETRRFTP
HVTLARLRRQ ATREGVAQYL AEQGVFAPLA FTAERVVLYS SRDSVGGGPY VVEAAYPLEA