Gene M446_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5436 
Symbol 
ID6130802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5968379 
End bp5969806 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content72% 
IMG OID641645570 
Productinner-membrane translocator 
Protein accessionYP_001772186 
Protein GI170743531 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.633528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC CCGCCCCCGC TCCCGCCCTG GCGGCCGGCT CCGGCGCCGC CCGCCCCGGC 
CTCGACGTGG CCGGCATCGT CAAGGATGCG GCCCTGTTCG CCCTCGTGAC CCTCGGCCTC
TGCGTGCCGG TGGTCAGCTA CCGCACCGCG CTCGGCGGCG AGACCGGCGG CCTCTACCTG
ACGCCCCGCT GGGGCCTGGT GGCGCTCCTG TGCGGCCTCG TCTTCGTCGG GCGCATCGCC
CAGCGGGTCG TGCTCGCCAA CCGCGAGGCC CGCCGGGCGC TCACGCCCTC GCCCCGGCAG
GCGACCGAGG CGGTCGGCGC GGCCCCGAAC GCCGCCCAGA GGATCAGGGG CCTCGCCCTG
CCGGCCTTCC TGGGCGTCGC CCTGGCGCTG CCGCTCCTGG CGGTGCTCGG CACCGGCGGG
CTCAACGAAT CGCGCTACTG GATCGACCTC GCCATCCTGG TGCTCACCTA CGTGATGCTG
GGCTGGGGGC TCAACATCGT GGTGGGGCTC GCCGGGCTGC TCGACCTCGG CTACGTCGCC
TTCTACGCGG TGGGCGCCTA CACCTACGCC CTGCTCTCGA CGACCTTCGG CTTCTCCTTC
TGGATCTGCC TGCCGCTGGC CGGCCTGCTC GCCGCCTGCT GGGGCATGCT GCTCGGCTTC
CCGGTGCTGC GGCTGCGCGG CGACTACCTC GCCATCGTGA CCCTCGCCTT CGGGGAGATT
ATCCGCCTCG TCCTGATCAA CTGGACGGAC TTTTCGGGCG GCGCCGCCGG CATCTCGTCG
ATCCCGCGGG TCACGTTCTT CGGGCTGCCC TTCTCGGCGG ACGAGGACGG CTTCGCCGCG
ACGCTCGGGA TCGCCTTCAG CCCGATGCAC CGGGTGGTGT TCCTCTACTA CCTGATCCTG
GCGCTCGCGC TCCTCACCAA CGGGGTGACG CTGCGCATGC GCCGCCTGCC CCTCGGCCGG
GCCTGGGAGG CCCTGCGGGA GGACGAGATC GCCTGCCGCT CGCTGGGCAT CAACACCACC
AACACCAAGC TCACCGCCTT CGCGCTCGGG GCGATGTTCG GCGGCTTCGC GGGCTCGTTC
TTCGCGGTGC GGCAGGGCTT CGTGAGCCCC GAGAGCTTCA ACTTCCTGGA GAGCGCCATC
ATCCTCGCCA TCGTGGTGCT GGGCGGGATG GGCTCGCAGA TCGGCGTGGC CATCGCGGCC
GTGGCGATGG TGGCGGGGCC CGAATTGCTG CGCAACCTCG GCTTCCTCAA GGCCGTGTTC
GGCGAGGGCT TCGACCCGAG CGAGTACCGC CTGCTGCTGT TCGGCCTCGC CATGGTGCTG
ATGATGATCT GGCGGCCGCG CGGCCTGATC TCGGAGCGGG CGCCCTCCGT GGTGCTGAAG
GAGCGAAAGG CCATCGCGGG CTCCCTCGTG AAGGAGGGGC ACGGCTGA
 
Protein sequence
MSAPAPAPAL AAGSGAARPG LDVAGIVKDA ALFALVTLGL CVPVVSYRTA LGGETGGLYL 
TPRWGLVALL CGLVFVGRIA QRVVLANREA RRALTPSPRQ ATEAVGAAPN AAQRIRGLAL
PAFLGVALAL PLLAVLGTGG LNESRYWIDL AILVLTYVML GWGLNIVVGL AGLLDLGYVA
FYAVGAYTYA LLSTTFGFSF WICLPLAGLL AACWGMLLGF PVLRLRGDYL AIVTLAFGEI
IRLVLINWTD FSGGAAGISS IPRVTFFGLP FSADEDGFAA TLGIAFSPMH RVVFLYYLIL
ALALLTNGVT LRMRRLPLGR AWEALREDEI ACRSLGINTT NTKLTAFALG AMFGGFAGSF
FAVRQGFVSP ESFNFLESAI ILAIVVLGGM GSQIGVAIAA VAMVAGPELL RNLGFLKAVF
GEGFDPSEYR LLLFGLAMVL MMIWRPRGLI SERAPSVVLK ERKAIAGSLV KEGHG