Gene M446_5394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5394 
Symbol 
ID6132444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5927876 
End bp5928733 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content75% 
IMG OID641645528 
Productindole-3-glycerol-phosphate synthase 
Protein accessionYP_001772144 
Protein GI170743489 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0134] Indole-3-glycerol phosphate synthase 
TIGRFAM ID[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.467387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.310018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGAGC CGAAGAGCCC TGCGCCCGCC GACCGGCCGG CCTCCGCCGC CCGCCCGGAC 
GTGCTGGCCC ATATCGAGGC CTACAAGCGC CGCGAGATCG CCGAGGCGAA GCTGCGCGTG
CCCCTCGCCG AGCTGGAGCG CCGCGCCGAG AAGGCCGACC CGCCCCGCGG CTTCGCGGAG
GCGATCCGGG CCGATCTCGC GGCGGGCCGC CCCGCCCTCA TCGCCGAGAT CAAGAAGGCC
TCCCCCTCCA GGGGGCTGAT CCGCGCGGAT TTCGACCCGC CGGCGCTGGC CCGCGCCTAC
GCGGAGGGCG GGGCCACCTG CCTGTCGGTC CTCACCGACG AGCCCTCCTT CAAGGGCCGG
CCCGAATACC TGACGGCGGC CCGGCAGGCC TGCCCGCTGC CGGTCCTGCG CAAGGACTTC
CTGTTCGAGC CCTACCAGGT GGTGGAGGCC CGGGCCTGGG GGGCGGATTG CATCCTGGTC
ATCATGGCGA GCCTCGACGA CGAGGAGGCG GCCGCGCTCG TCGCGACGGC CCACGACCTC
GGCATGGACG TGCTGGTCGA GGTGCACGAC CGCGCCGAGC TGGAGCGGGC GCTCCCCCTC
GGGACCCGGA TGATCGGCAT CAACAACCGC GACCTGCGCA CCTTCGAGGT CTCGCTGGAG
ACCGCGCTCG CCCTGCGGCC CCTGGTGCCG GAGGACCGCA TCGTGGTGGG CGAGAGCGGC
ATCGCCGGCC ATGCCGACGC GCAGCGGCTC GCCCGGGCGG GCATCCGCAC CCTCCTGGTC
GGCGAGAGCC TGATGCGCGA GGCGGACGTG ACGGCGGCGA CGCGGCGGCT GCTGTTCGGG
GAGCCGGCGG GTTCGTGA
 
Protein sequence
MFEPKSPAPA DRPASAARPD VLAHIEAYKR REIAEAKLRV PLAELERRAE KADPPRGFAE 
AIRADLAAGR PALIAEIKKA SPSRGLIRAD FDPPALARAY AEGGATCLSV LTDEPSFKGR
PEYLTAARQA CPLPVLRKDF LFEPYQVVEA RAWGADCILV IMASLDDEEA AALVATAHDL
GMDVLVEVHD RAELERALPL GTRMIGINNR DLRTFEVSLE TALALRPLVP EDRIVVGESG
IAGHADAQRL ARAGIRTLLV GESLMREADV TAATRRLLFG EPAGS