Gene M446_5352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5352 
Symbol 
ID6129955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5881232 
End bp5881846 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID641645482 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001772104 
Protein GI170743449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.128052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAT GGCTCGCCGT CATCGTCATC ACCACCCTCG CGGTGATCAG CCCGGGACCG 
GATTTCGCGA TGGTCTCGCG CAACAGCCTC GTGCTCTCCC GGCGCGCCGG CCTGTTGACG
GCCCTCGGCA TCGACCTCGG GGTCGCGGTC CACGTCGCCT ACACGCTGCT CGGCCTCGGT
CTCGTCATCC GCCAGTCGAT GATCCTGTTC TCGGCGCTGA AGCTCGCCGG CGCCGCCTAC
CTGGTGTGGC TCGGCCTGCG GATGCTGGCG GCGCGACCGC GCGCCCGGGC GCCGGAGGCG
GGCGCCGCCC CGTCGGCGGC GGCGGCCCTG CGGACCGGCT TCCTCACCAA CGCCCTCAAT
CCCAAGACCT CGGTCTTCGT CGTCAGCCTG TTCATGCAGG TGGTCCGGCC GGAGACGCCG
CCCGGCGTTC AGCTCGCCTA CGGCGCCTTT CTGATGGCGG CGCACGCGCT CTGGTTCGCG
CTGGTGGCAC TGCTCTTCTC GCAGCCGGGC CTGCGCCGGA TCCTCCTCGC CGCCGGTGGC
TGGATCGACC GCGCGTTCGG GGCGGTCCTC ATCGGGTTCG GCGCGGCACT GGCCGCCGCC
TCCCTGGAGC GGTAG
 
Protein sequence
MTEWLAVIVI TTLAVISPGP DFAMVSRNSL VLSRRAGLLT ALGIDLGVAV HVAYTLLGLG 
LVIRQSMILF SALKLAGAAY LVWLGLRMLA ARPRARAPEA GAAPSAAAAL RTGFLTNALN
PKTSVFVVSL FMQVVRPETP PGVQLAYGAF LMAAHALWFA LVALLFSQPG LRRILLAAGG
WIDRAFGAVL IGFGAALAAA SLER