Gene M446_5351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5351 
Symbol 
ID6129954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5880247 
End bp5881125 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content78% 
IMG OID641645481 
ProductLysR family transcriptional regulator 
Protein accessionYP_001772103 
Protein GI170743448 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.071611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCCC GGCTGCCGCC GCTCGGCGCC CTGCGCTGCT TCGAGGCGGC GGCCCGCCTG 
GAGAGCTTCA CCCGGGCGGC CGACGAACTG CACCTCACCC ACGGCGCCGT CAGCCGGGCG
GTGCGGGCGA TCGAGGAGGA TCTCGGCCTG CCTCTGTTCG AGCGGCGCAG CCGGCGGGTC
CGCCTGAACG CGGCCGGCGC GATCCTGCAC CGGGCGGTGG CCGAGGCGTT CGCGACGATC
CGGTCGGCGA CGCGCGCCCT GCGGGCCGAG GCCCGGCAAT CGCCGCTGGT CCTGTCCTGC
GAGCCGACCC TGCTGATGCG CTGGCTGATC CCCCGGCTGC CGGCCCTGCA GGAGGCCCAT
CCCGACCTCG CGCTCCACCT CGTCTCCGGC GGCGGCACGC CCCGCTTCGA GGACGGGCTC
GACCTCGCGC TCCGCCGCAA CGACCATCCG CCGGCACCGG GCGCCCACGC GGCGATCCTG
TTCGCCGAGA GGGTGGGCCC GGTCTGCGCC GCCGCCCGGG CCGGCGACTT CGTGGCGGAG
ACGGGCGAGG GACCGGCCTT CCGGCCCGGG ACGCCGCGGC TGCACAGCCG CACCCGGCCC
GCGGCCTGGG CCGACTGGGC CGCGCGGAGC GGGCGCCCGG CACCGGACGG GCCGGAGCAC
CGGTTCGAGC ACTTCTCCCT CAGCCTGCAG GCCGCCGCCG CCGGGATCGG GGTGGCGATC
GGACCCTGGC GGCTCGTCTG CGACGACGTG GCGGGCGGCC TCCTGGCGGC GCCCTTCGGC
TTCGTCGCGG ACGGCACGGA TTACCGCCTG CTGGCGCCCC GCCCGATCGC GGCGGGCTCG
GCGCAGGCGC GGCTCGCCGC GTGGCTGCGC GATTGCTGA
 
Protein sequence
MPARLPPLGA LRCFEAAARL ESFTRAADEL HLTHGAVSRA VRAIEEDLGL PLFERRSRRV 
RLNAAGAILH RAVAEAFATI RSATRALRAE ARQSPLVLSC EPTLLMRWLI PRLPALQEAH
PDLALHLVSG GGTPRFEDGL DLALRRNDHP PAPGAHAAIL FAERVGPVCA AARAGDFVAE
TGEGPAFRPG TPRLHSRTRP AAWADWAARS GRPAPDGPEH RFEHFSLSLQ AAAAGIGVAI
GPWRLVCDDV AGGLLAAPFG FVADGTDYRL LAPRPIAAGS AQARLAAWLR DC