Gene M446_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5333 
Symbol 
ID6129530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5857109 
End bp5859535 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content70% 
IMG OID641645463 
ProductDNA gyrase, B subunit 
Protein accessionYP_001772085 
Protein GI170743430 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.248882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0644472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CCGCCCGCGA TCTGACCCCC GACACCTACG GCGCCGATTC CATCAAGGTC 
CTCAAGGGCC TCGACGCGGT GCGCAAGCGG CCCGGCATGT ATATCGGCGA CACCGACGAC
GGCTCGGGCC TGCACCACAT GGTCTACGAG GTCGTCGACA ACGCCATCGA CGAGGCCCTG
GCCGGCCACG CCACGCTGGT GACCGTGACG CTCAACCCGG ACGGCTCCTG CACGGTCTCG
GACAATGGCC GCGGCATTCC CACCGACATC CACGCGGAGG AGGGGGTCTC GGCCGCCGAG
GTCATCATGA CCCAGCTCCA CGCGGGCGGG AAGTTCGACC AGAACTCCTA CAAGGTCTCG
GGCGGCCTGC ACGGGGTCGG CGTCTCGGTG GTGAACGCGC TCTCGACCTG GCTGCGCCTG
CGCATCTGGC GCGGCGGCCA GGAGCACGCG ATGGAGTTCC GCCACGGCGA CGCGGTGGCG
CCGCTCGCCG TCGTCGGCCC GGCCGGGGAC CGGCGCGGCA CCGAGGTCAC CTTCCTGCCC
TCGACCGAGA CCTTCTCGAT GGTCGAGTTC GACTACGCGA CGCTGGAGAA GCGCCTGCGC
GAACTCGCCT TCCTGAATTC GGGCGTGCGC ATCGTGCTGA CCGACGCCCG CCACGCCGAG
CACAAGCGCG AGGAACTGGT CTACGAGGGC GGCGTCGAGG CCTTCGTGCG CTACCTCGAC
CGCACCAAGA CGCCGCTCGT CGCCAAGCCG GTGGTGGTCC GCGCCGAGCG CGACGGGATC
AGCGTCGAAG TCGCCCTGTG GTGGAACGAC AGCTATCACG AGACGGTGCT GCCCTTCACC
AACAACATCC CGCAGCGGGA CGGCGGCACC CACATGGCGG GGTTCCGGGC GGCGCTGACG
CGCCAGATCA CCGGCTACGC CGAATCCTCC GGCATCGCCA AGAAGGAGAA GGTCACGCTC
ACGGGCGACG ATTGCCGCGA GGGCCTGACC GCGATCATCT CGGTGAAGGT GCCGGACCCG
AAATTCTCCT CGCAGACCAA GGACAAGCTG GTCTCCTCCG AGGTCCGCCC GGTCGTCGAG
GCGGTGCTCG GCGAGGGATT GTCGAACTGG CTGGAGGAGA ATCCGGGCGA GGCGCGCACC
ATCGTGGGCA AGGTGGCCGA GGCCGCCGCC GCCCGCGAGG CCGCCCGCAA GGCCCGCGAG
CTCACCCGCC GCAAGGGCGC CCTCGACATC GCCTCGCTGC CGGGCAAGCT CGCCGATTGC
CAGGAGCGCG ACCCGTCGAA GTGCGAGATC CTGCTCGTCG AGGGCGACTC GGCCGGCGGC
TCGGCCAAGC AGGGCCGCGA CCGCACCTTC CAGGCGGTGC TGCCGCTGCG CGGCAAGATC
CTCAACGTCG AGCGCGCCCG CTTCGACAAG ATGCTGTCGA GCCAGGAGAT CGGGACGCTG
ATCACGGCGC TCGGCACCGG CATCGGCCGC GAAGAGTTCA ACCCCGACAA GCTGCGCTAC
CACCGCATCA TCATCATGAC GGACGCGGAC GTCGACGGCT CGCACATCCG CACCCTGCTG
CTCACCTTCT TCTTCCGGCA GATGCCGGAG CTGATCGAGC GCGGGCACCT CTACATCGCG
CAGCCGCCGC TCTACAAAGC CTCGAAGGGG CGCTCGCACC TCTACCTGAA GGACGAGCGC
GCGCTGGAGG ATTACCTGAT CGACGGCGGC GTCGAGGGCG CCTCCCTGCG GCTCGCCACC
GGCGTCGCCT TCGCGGGTCC GCAGCTCAAG GCGCTGGTCG ACGAGGCGCG CGGGGTGCGC
ACCATCCTGC ACGGGCTCCA CACCCGCTAC GACCGCACCG TGGTCGAGCA GGCGGCGATC
GCCGGGGCGC TGCGCCCGGC GCTGGCCGAG AACCCGGCCG AGGCGGAGGT CGTGGCCGAC
GAGGTCGCCC GGCGGCTCAA CGCCCTCTCG GACGAGATCG AGCGCGGCTG GGAGGGCGAG
GCGCGGGCCG GCGGCTACGT CCTGTCGCGG ACCCTGCGCG GCGTGCGGCA GGTGGCGGTG
CTCGACGAGG CGCTGATCTC CTCGCAGGAG GCCCGCCGCC TCGACGAGCG CACGGATTCC
CTGCGCCAGA TCTACGACGC GCCGGTCACC CTGCAGCGCA AGGGCGAGGA GGTCGTGCTG
CACGGCCCCG TGGCCCTGTT CGAGACCACG ATGGCGCTCG GCCGCAAGGG CCTCCAGCTC
CAGCGCTACA AGGGCCTGGG CGAGATGACC GCCCAGCAGC TCTGGGAGAC GACCCTCGAC
CGCGACGTGC GCTCGCTGCT GCAGGTCAAG GTCAAGGACA CGACCGACGC CGACGACCTG
TTCGTGAAGC TGATGGGCGA CGTGGTCGAG CCGCGCCGCG AGTTCATCCA GGAGAATGCG
CTGAACGTCG CCAACCTCGA CGTGTAG
 
Protein sequence
MAEPARDLTP DTYGADSIKV LKGLDAVRKR PGMYIGDTDD GSGLHHMVYE VVDNAIDEAL 
AGHATLVTVT LNPDGSCTVS DNGRGIPTDI HAEEGVSAAE VIMTQLHAGG KFDQNSYKVS
GGLHGVGVSV VNALSTWLRL RIWRGGQEHA MEFRHGDAVA PLAVVGPAGD RRGTEVTFLP
STETFSMVEF DYATLEKRLR ELAFLNSGVR IVLTDARHAE HKREELVYEG GVEAFVRYLD
RTKTPLVAKP VVVRAERDGI SVEVALWWND SYHETVLPFT NNIPQRDGGT HMAGFRAALT
RQITGYAESS GIAKKEKVTL TGDDCREGLT AIISVKVPDP KFSSQTKDKL VSSEVRPVVE
AVLGEGLSNW LEENPGEART IVGKVAEAAA AREAARKARE LTRRKGALDI ASLPGKLADC
QERDPSKCEI LLVEGDSAGG SAKQGRDRTF QAVLPLRGKI LNVERARFDK MLSSQEIGTL
ITALGTGIGR EEFNPDKLRY HRIIIMTDAD VDGSHIRTLL LTFFFRQMPE LIERGHLYIA
QPPLYKASKG RSHLYLKDER ALEDYLIDGG VEGASLRLAT GVAFAGPQLK ALVDEARGVR
TILHGLHTRY DRTVVEQAAI AGALRPALAE NPAEAEVVAD EVARRLNALS DEIERGWEGE
ARAGGYVLSR TLRGVRQVAV LDEALISSQE ARRLDERTDS LRQIYDAPVT LQRKGEEVVL
HGPVALFETT MALGRKGLQL QRYKGLGEMT AQQLWETTLD RDVRSLLQVK VKDTTDADDL
FVKLMGDVVE PRREFIQENA LNVANLDV