| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5325 |
|---|
| Symbol | |
|---|
| ID | 6132774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5842429 |
|---|
| End bp | 5844099 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641645455 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_001772077 |
|---|
| Protein GI | 170743422 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.473909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0899605 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCC GAAGCAAGCT GCTCGCCCTC ATGGGCGCGC TCGGGGGCGT GACGCTCCTG
GTGGCGGCGC TGGCCGTGCA CTTCCTGGCG GCGGTCGGCG GCGACCTGGA AGCGGTGCGG
GCGACCTCGA CCCGGGCGCT CTACAGCGAG CGGCTGAACC GCCTCGTCAC GGCCGCCGTG
ATGGAGTCCC GCGGGATCTA CGCCGCGAAG GACGTCGCGG AGGCGCGGCC CTTCGCGGAC
GGGCTCGTGG CCTCGCTCGA CGCGGTCGAC GCGCTCCTCG CCCGCTGGAC CCCCCTCGTC
CCGGACGAGG AAAGGCCCCT GCTCGAGGCG GTGGTCAAGG GGGCGGCGGC CTTCCGGAGC
TTCCGGCTCG AGACGGTGCG GCTCGCCCGC GAGGTCTCGC CCCAGGCCGC GGCCCTGCAG
GGCAACAACG AGGCGAACCG GGCCAACCGC AAGGCCTTCC AGGTCAGCAT CGACGCGCTG
ACCGCCCACA GCCAGGATTC CGTCGCGGCG ATCGAGGGGC AGGCGCGGCG CCTCGCCGAC
GACCGCATGC GGCTGCTGCT CGGGCTCGCC CTCGGCGGAG CGCTGGCCTC GGTCGCGCTC
GGGGCCCTGG TGGCCCAGCG CCAGATCGGG CGGCCGCTGC AGCAGGTCAC GGCGGCGATC
CGGGCCCTCG CCGCGGGCGA GGTGCGGCTG CCGCAGGCGG TGCGGCGCCG GGACGAGATC
GGCGAGATCT GGGCCAGCAT GGCGGTCTTC GCCGAGGCGA TGCGCGAGGC CGAGACCCTG
CGCGGCCGGG AGGCCGAGGG CGAGCGCCGG GCGAGCGCCG AGCGCCGGGC GCAGCAGGCC
GCCCTCGGGC AGCGCTTCGA GGAGAGCGTC GGGGGCTTGG TGAGGCAGGT CGCGGCGGCG
GCGCGGGCGA TGGAGGATCA GGCCCGCACG CTGGTGGAGA CCGCCGACGT GGCGACCCGC
GACGCGCAGA TCGTGTCCGG GGCGGCGCAG CGGACCTCGT CGCACGTGGC GACCGTGGCG
GCGGCCACGG AGGAGATGTC GGCCTCGATC CAGGAGATCG TCGAGCGGGT CGACGCCTCC
TCGCAGGTGG CCGGCCAGGC GCAGGAGGAT GCCCGCCGCA CCGATGCCAG CGTGCAGCAG
CTGGCGGCGA GCGCCGAGCG GATCAGCCGC GTCGTGGCGG TGATCTCCGA CATCGCGGCG
CAGACGAACC TGCTGGCCTT GAACGCCACG ATCGAGGCGG CGCGGGCCGG CGAGGCGGGC
CGCGGCTTCG CGGTCGTCGC CGCCGAGGTG AAGAGCCTCG CCGGGCAGAC CGCCCGGGCG
ACGGAGGAGA TCGCCGGTCA TATCGGCGAG ATCCAGGCCG CCACGCGGGC GGCGGTGGCG
GATCTCGGCC GCATCGGCGG CGTGATCGCC ACGATGTCGG GCGCGGCGGG CGCCATCGCG
GCGGCCGTCT CGCAGCAGGG CGGCGCGACC CGCGAGATCG CCCGCAGCGC GCAGGAGGCC
GCCGCCGGGA CCGCGCAGGT GACGCAGACC GTGACCGAGC TGCACCGCGG CGCGGGCCTG
ACGGGCGACG CGGCCGCCCG GGTGCTGGAG GCCGCCAACG CGGTGTCGGA CTGCTCCGAC
ACCCTCACCC GCGAGGTGAG CGGCTTCCTC TCGGCCCTCT CCGCCGCGTG A
|
|---|
| Protein sequence | MRIRSKLLAL MGALGGVTLL VAALAVHFLA AVGGDLEAVR ATSTRALYSE RLNRLVTAAV
MESRGIYAAK DVAEARPFAD GLVASLDAVD ALLARWTPLV PDEERPLLEA VVKGAAAFRS
FRLETVRLAR EVSPQAAALQ GNNEANRANR KAFQVSIDAL TAHSQDSVAA IEGQARRLAD
DRMRLLLGLA LGGALASVAL GALVAQRQIG RPLQQVTAAI RALAAGEVRL PQAVRRRDEI
GEIWASMAVF AEAMREAETL RGREAEGERR ASAERRAQQA ALGQRFEESV GGLVRQVAAA
ARAMEDQART LVETADVATR DAQIVSGAAQ RTSSHVATVA AATEEMSASI QEIVERVDAS
SQVAGQAQED ARRTDASVQQ LAASAERISR VVAVISDIAA QTNLLALNAT IEAARAGEAG
RGFAVVAAEV KSLAGQTARA TEEIAGHIGE IQAATRAAVA DLGRIGGVIA TMSGAAGAIA
AAVSQQGGAT REIARSAQEA AAGTAQVTQT VTELHRGAGL TGDAAARVLE AANAVSDCSD
TLTREVSGFL SALSAA
|
|---|
| |