Gene M446_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5312 
Symbol 
ID6135255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5829386 
End bp5829691 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content69% 
IMG OID641645444 
Productsurface presentation of antigens (SPOA) protein 
Protein accessionYP_001772067 
Protein GI170743412 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0287673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGTTC TCGAAGAGCT CAAGGTGGAT CTCACGGTCG TGCTCGGCCG GACCCGGATG 
CCGATCCACA TGCTGTTGCG CATGGGGCGC GGCGCGGTGA TCGAACTCGA TGCGACCGAT
TCCGATATGG TCGATATCCT GGCCAACGAC CACCCGATCG CCCGCGGGCA GATCGTGGTG
ACGGGCAACC GCATCTCCGT GGAGGTGACG GAGCTGATCC GCAAGGCCGA CGTGGTGCGC
GAGCCCGGCG TGCGCGTCGG CGAGGGCGCC GGCGCCCTCC TGAGCGAGGC CCCGACCCCG
CCGTGA
 
Protein sequence
MAVLEELKVD LTVVLGRTRM PIHMLLRMGR GAVIELDATD SDMVDILAND HPIARGQIVV 
TGNRISVEVT ELIRKADVVR EPGVRVGEGA GALLSEAPTP P