Gene M446_5281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5281 
Symbol 
ID6128978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5796326 
End bp5797054 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID641645416 
Productacetoacetyl-CoA reductase 
Protein accessionYP_001772039 
Protein GI170743384 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01829] acetoacetyl-CoA reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.815871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.208516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC GCGTCGCACT GGTCACAGGC GGAACGCGCG GCATCGGCGC CGCGATCTCG 
AAGGGTCTGA AGGACGCCGG CTACAAGGTG GCGGCGAATT ACGGCGGCAA CGACGAGGCC
GCGAATGCTT TCAAGGCCGA GACCGGGATC CCGGTGTTCA AGTTCGACGT CGGCGATCCG
GCCGCCTGCG AGGCCGGCAT CCGCGCCGCC GAGGCGGAAC TCGGCCCGGT CGACATCCTG
GTCAACAATG CCGGCATCAC CCGCGACGGC ATGTTCCACC GCATGACCTT CGAGCAGTGG
CAGGCGGTGA TCCGCACCAA CCTCGACTCG ATGTTCACCT GCACCCGCCC GGTGATCGAC
GGGATGCGGT CGCGCGGCTT CGGCCGCATC GTCCTGATCT CGTCCATCAA CGGCCAGAAG
GGCCAGATGG GCCAGACCAA CTACTCGGCC GCCAAGGCCG GCGTGATCGG CTTCGCCAAG
GCCCTGGCCC AGGAGAACGC CAACAAGGGC ATCACCGTGA ACGTGATCGC CCCCGGCTAC
ATCGCCACCG AGATGGTCAA GGCGGTACCC CAGGAGGTGC TCAAGACCAA GATCCTGCCG
CAGATCCCGG TCGGCCGCCT CGGCGAGGCC GAGGAGATCG CCCGCGCGGT GGAGTTCCTG
GCGAGCGACC ACGCCGGCTT CATCACCGGC TCGACCCTGA CCATCAACGG CGGCCAGTAC
TTCGCCTGA
 
Protein sequence
MAERVALVTG GTRGIGAAIS KGLKDAGYKV AANYGGNDEA ANAFKAETGI PVFKFDVGDP 
AACEAGIRAA EAELGPVDIL VNNAGITRDG MFHRMTFEQW QAVIRTNLDS MFTCTRPVID
GMRSRGFGRI VLISSINGQK GQMGQTNYSA AKAGVIGFAK ALAQENANKG ITVNVIAPGY
IATEMVKAVP QEVLKTKILP QIPVGRLGEA EEIARAVEFL ASDHAGFITG STLTINGGQY
FA