Gene M446_5273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5273 
Symbol 
ID6129315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5790391 
End bp5791248 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content72% 
IMG OID641645408 
ProductOstA family protein 
Protein accessionYP_001772031 
Protein GI170743376 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.267021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0648485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGCC GCCGCGCCGC CCTCGCCGCC CTGCTCCTCC TCGCGAGCCC GGCCCTGCCG 
CACGCCGAGG CGCCCAGGAA GGAGCGCAAT TCCGGCTTCG GCGCCTTCGG GAGTTCCGGC
AAGGAGCCGA TCAAGATCGA CGCCGACCGG CTCGACGTGT TCGACCACGA GAACAAGGCG
GTCTTCGCCG GCAACGTGGT GGCGGTGCAG GGCGAGAGCA CGATCCGCTG CTCCAGCATG
ACCGTCCATT ACCAGCGCAA CCGCGACAAG GGCGCCAAGG ACGAGGCCAG GGCCGAGGAG
GCCAAGCCCG CTGAAACCAA GCCCGCTGAA GCCAAGCCCG CTGAAACCAA GCTGGCCGAG
ACCAAGCCGG TCGGGGCCAA AGGCGCGGAT ACCAGGGCCG CCGATCCGAA GGGGGCGGAG
AGCAGGACCG GACAGGCGAA GCCGGCCGCG AGGCCCGCCG AGGTCAAGCC TGCCGACACG
CGGGCCGCGG AGGCGAAGCC GGTCGACCCG ACCGACAGCG GGGCGATCCG GCAGGTGGTC
TGCGCCGGGC CGGTGACGGT GGTGAACAAG GATCAGGTGG CGACCGGCGA CAACGCCGTG
TTCGACAAGG CGGCGAACCG GGTGATCCTC ACGGGCAACG TGGTGCTGAG CCAGTGCCAG
AACGTCACCC GCGGCAACCG CCTCGTCTAC GACATGAATA CCGGCCGGGC GAATATGGAC
CCGACCGCGG GCGGGCGCGT CTCGGCGATG TTCGTGCCGG GCGGCAAGGA CGAGAAGGCG
GGCAAGCCGG CCGGCTGCCC GGCCCCGGCG GGCCAGGCCG GCAAGCCCGC TCCGAAGCCC
CGCGCCCAGG CGAACTGA
 
Protein sequence
MTCRRAALAA LLLLASPALP HAEAPRKERN SGFGAFGSSG KEPIKIDADR LDVFDHENKA 
VFAGNVVAVQ GESTIRCSSM TVHYQRNRDK GAKDEARAEE AKPAETKPAE AKPAETKLAE
TKPVGAKGAD TRAADPKGAE SRTGQAKPAA RPAEVKPADT RAAEAKPVDP TDSGAIRQVV
CAGPVTVVNK DQVATGDNAV FDKAANRVIL TGNVVLSQCQ NVTRGNRLVY DMNTGRANMD
PTAGGRVSAM FVPGGKDEKA GKPAGCPAPA GQAGKPAPKP RAQAN