Gene M446_5231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5231 
Symbol 
ID6131145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5752254 
End bp5753456 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content76% 
IMG OID641645365 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001771989 
Protein GI170743334 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.850734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0224703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGAGG ACGGAACGGG CGCCCGCCCG CTCACCGGGA TCACGGTGCT GGCGCTCGAA 
CAGGCGGTGG CGGCGCCCTA CTGCTCGTCG CGGCTGGCGG ATGCCGGCGC CCGGGTGATC
AAGGTCGAGC GGCCGGAGGG CGACTTCGCC CGCGGCTACG ACGACGCCGT GAACGGGCTC
TCGACCTACT TCGTCTGGCT CAACCGGGGC AAGGAGAGCC TCGTCGCCGA CATCAAGGCC
CCGGACGACG CCGCGCTCCT GCACGCCATC CTGGCCGAGG CGGACGTGTT CATCCAGAAC
CTCGCCCCGG GCGCCGCGGC CCGGGCCGGG TTCGGCGCGG GCGCCCTGCG GGCGCGCCAT
CCCCGCCTGA TCACCCTCGA CATCACCGGC TACGGCAGCG GCCACGCCTA CGCGCAGATG
AAGGCCTACG ACCTCCTGGT CCAGGCCGAG AGCGGGCTCG CCGCCATCAC GGGCCACCCG
GCCGGGCCCG GCCGGGTCGG CGTCTCGGTC TGCGACATCG CCTGCGGCAT GGCCGCCCAC
GCCGCCGTGC TGGAGGCGCT GATCGGCCGC GAGCGCAGCG GGCGCGGCGC GGCGCTCGAA
GTGAGCCTGT TCGACGGCAT AGCCGACTGG ATGAACGTGC CGCTCCTCTA CTACGAGGGC
ACCGGCCGGG CGCCGCAGCG GGTCGGCCTC GCCCATCCGT CGATCTGCCC CTACGGGGCG
TTCCGCACCG CCGATGACGG CCTGGTGCTG ATCTCGATCC AGAACGAGCG CGAGTGGGCC
GCCTTCTGCG CCGGCCTGCT CGGGGAGCCG GACCTGCCGG GCCGGGAGGG CTTCCAGTCG
AACACGGTCC GGGTCGCGAA CCGGCCGGCG GTGGATGCGA GGGTGGCGCG GGCCTTCGCG
GCCCTCACCC GCGACGAGGC GGCGGCGCGG CTGCGCGCGA GCGGCACCGC CTACGGCTTC
GTCAACGAAC TCGCCGACCT CGTCGCCCAC CCGGCCCTGC GGCGCGTCGC GGTCGAGACG
CCGGCGGGGA CGGCCCTGAT CGTGGCGCCC CCGGCGCTGA TCGACGGCCG CGCCCGGCCC
CTCGGGCCGG TGCCGGCGAT CGGCGCCCAC GGGGCCGCCA TCCGGGCCGC GTTCGGCGCC
GCCGCCCGCG GCCGTCCCGG CCCCGGCGCG ACCGGGATCG GGCGCCCGGA AACTGGCCCA
TGA
 
Protein sequence
MTEDGTGARP LTGITVLALE QAVAAPYCSS RLADAGARVI KVERPEGDFA RGYDDAVNGL 
STYFVWLNRG KESLVADIKA PDDAALLHAI LAEADVFIQN LAPGAAARAG FGAGALRARH
PRLITLDITG YGSGHAYAQM KAYDLLVQAE SGLAAITGHP AGPGRVGVSV CDIACGMAAH
AAVLEALIGR ERSGRGAALE VSLFDGIADW MNVPLLYYEG TGRAPQRVGL AHPSICPYGA
FRTADDGLVL ISIQNEREWA AFCAGLLGEP DLPGREGFQS NTVRVANRPA VDARVARAFA
ALTRDEAAAR LRASGTAYGF VNELADLVAH PALRRVAVET PAGTALIVAP PALIDGRARP
LGPVPAIGAH GAAIRAAFGA AARGRPGPGA TGIGRPETGP