| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5226 |
|---|
| Symbol | |
|---|
| ID | 6131140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5746889 |
|---|
| End bp | 5748214 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641645360 |
|---|
| Product | TRAP dicarboxylate transporter, DctM subunit |
|---|
| Protein accession | YP_001771984 |
|---|
| Protein GI | 170743329 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.397453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0960197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCATCATCTT CGGGCTCCTC GTCGCCCTGA TGCTCACCGG CATGCCGATC
TCGATCGCGC TCGGCCTCTC GGTGCTCACC TTCCTGTTCG TGATGACGAG CGTGCCGATC
GAGGCGGTGG CGCTCAAGCT GTTCACCGGG ATCGAGAACT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TGTCGGGCAA CTTCCTCACC CATGGCGGCG TCGCCCGGCG GATGATCAAC
TTCGCCACCG CGATGGTCGG CCACTGGTAC GGGGGGCTCG GCCTCGCGGG CGTGATGGCC
TGCGCGCTCT TCGCGGCGAT CTCGGGATCG AGCCCCGCGA CCGTGGTGGC GATCGGCTCG
ATCATCCTGC CCGCCATGGT GGCGCAGGGA TTCCCCAAGA AGTTCGGCGC GGGCGTGATC
ACCACCTCGG GGGCGCTCGG CATCCTGATC CCGCCCTCGA TCGTCATGGT GATGTACTCG
GTGGCGACGA GCGGCGCCGT GGTGTTCGGG CCGGACGGCA ACCGGGTCTC CTCGGCCTCG
ATCTCGACGC TGTTCGTGGC CGGCGTGGTG CCGGGGCTGA TGCTGGCGGG CCTGCTCGGC
CTCACCACGT GGTACCGCGC CCGCCGGAAC GACTACCCGC GCCTGCCCCG CGCCTCCTGG
CGCGAGCGCT TCGTGGCCTT CCGCAAGTCC CTCTGGGGGC TGCTGCTCAT CGTGCTGGTG
CTCGGCGGCA TCTACACGGG CGCCTTCACG CCCACCGAGG CGGCGGCGGT CAGCGCCGTC
TACGCCTTCG TGATCGCGGT CTTCGTCTAC CGCGACCTGA CCTGGCGCGA CGTGCCGCGG
GTGCTGCTCG ATTCCGCCAA CATGAGCGCG ATGCTGCTCT ACATCATCAC CAACGCGGTG
CTGTTCTCGT TCCTGATGAC GAGCGAGCAG ATCCCGCAGG CCATGGCCGG CTGGATCACC
CAGGCCGGCC TCGGCTGGGT GGTGTTCCTG CTCATCGTGA ACGTGCTGCT GCTCGTCGCC
GGGAACGTGA TGGAGCCCTC CTCCATCGTG CTGATCATGG CGCCGATCCT GTTCCCGATC
GCCGCCAAGC TCGGCATCGA CCCGGTCCAT TTCGGCATCC TGATCGTGGT CAACATGGAG
GTCGGCATGT GCCACCCGCC GGTGGGGCTG AACCTCTACG TGGCCTCGGG CATCACCAAG
ATGGGCATCA CCGAACTCAC CGTCGCGGTC TGGCCCTGGC TGCTGACGAT GCTGGTCTTC
CTCGTCATCG TCACCTACGT GCCGGCCCTG TCGCTGGGGC TGCCGCGGCT GCTCGGGATG
CTGTGA
|
|---|
| Protein sequence | MNAAIIFGLL VALMLTGMPI SIALGLSVLT FLFVMTSVPI EAVALKLFTG IENFEIMAIP
FFILSGNFLT HGGVARRMIN FATAMVGHWY GGLGLAGVMA CALFAAISGS SPATVVAIGS
IILPAMVAQG FPKKFGAGVI TTSGALGILI PPSIVMVMYS VATSGAVVFG PDGNRVSSAS
ISTLFVAGVV PGLMLAGLLG LTTWYRARRN DYPRLPRASW RERFVAFRKS LWGLLLIVLV
LGGIYTGAFT PTEAAAVSAV YAFVIAVFVY RDLTWRDVPR VLLDSANMSA MLLYIITNAV
LFSFLMTSEQ IPQAMAGWIT QAGLGWVVFL LIVNVLLLVA GNVMEPSSIV LIMAPILFPI
AAKLGIDPVH FGILIVVNME VGMCHPPVGL NLYVASGITK MGITELTVAV WPWLLTMLVF
LVIVTYVPAL SLGLPRLLGM L
|
|---|
| |