Gene M446_5188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5188 
Symbol 
ID6135571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5712021 
End bp5712989 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content74% 
IMG OID641645323 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001771947 
Protein GI170743292 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0996963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA TCCTGATCAC CGGCGCGACG GGTTTCGTCG GCCGCCACGC GGCCGCCGCC 
TTCCTCGACC GGTTCGGCGC CGGCGCGGAG ATCGTCGGTC TCGGCCGCGA GGCCAGGCCG
GCGGCGCTTT CCGCCGGGAT CGGCTACGTC GCGGCCGACC TGTCGGACGG TCGCCGCACG
GCGGAGTGCC TGCGCGAGGT CGCGCCGACG GACATCCTCC ACCTCGCCGC CCTCTCCTCC
GTCTCGGACG CCGCCGCGCG GCCGGTCCGG GCCTGGAGCG AGAACGTCGG CACGGTGCTG
AGCCTCGCAT CGGCGCTGGT CGACCACCTG CCCGGGACGA ACCTGTTCTT CGTGAGTTCC
GGGGAGGTGT ACGGTCGGGC CTTCCTGTCG GGACAGCCCG TCGGCGAGGC GGTCCGGCCG
GAGCCGGCGA GCACCTACGC CAAGACGAAG CTCGTCGGCG AGCAGATCCT GACGGACGTG
CTGGGCCGGG CGGGGTCGCG CCTGGTGATC CTGAGGCCGC TCAACCACAT CGGCCCGGGC
CAGAGCGAGC GGTTCGTGGT CGCCTCGTTC GCCGCGCAGA TCGCCCGCAT CGAGGCGCAG
CTGGTTCCGC CCGTGCTGGA GGTCGGGGAC CTCTCGGCCC GTCGCGACTT CCTGGACGTC
CGCGACGTCG TCGAGGCCTA TGCGGGTCTG GTCGCGGCCG CCGACACGCT CGACCGATGC
AGCATCTTCA ACATCGCCTC CGGCCAGGCG CGGTCGATCG GCAGCCTGCT GGAGACGCTG
GCATCCCTCT CGCGCAGGCC CTTCGAGGTG CGGGTGGCGC AGGAGCGGCT GCGCCCCTCC
GAGATCCCGA CCGCCTGCGG GGACGCCTCG GCGCTGGCCG CCCGCACCGG CTGGGCCCCG
AAGCGCTCCC TCACCGAGAC GCTCGCCTCC GTTCTCGACC ACGCGCGGGC GGAGGTCCGC
CACGGCTGA
 
Protein sequence
MKRILITGAT GFVGRHAAAA FLDRFGAGAE IVGLGREARP AALSAGIGYV AADLSDGRRT 
AECLREVAPT DILHLAALSS VSDAAARPVR AWSENVGTVL SLASALVDHL PGTNLFFVSS
GEVYGRAFLS GQPVGEAVRP EPASTYAKTK LVGEQILTDV LGRAGSRLVI LRPLNHIGPG
QSERFVVASF AAQIARIEAQ LVPPVLEVGD LSARRDFLDV RDVVEAYAGL VAAADTLDRC
SIFNIASGQA RSIGSLLETL ASLSRRPFEV RVAQERLRPS EIPTACGDAS ALAARTGWAP
KRSLTETLAS VLDHARAEVR HG