| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5141 |
|---|
| Symbol | |
|---|
| ID | 6131707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 5650501 |
|---|
| End bp | 5651448 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641645276 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001771901 |
|---|
| Protein GI | 170743246 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.103632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0196621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCT ACCTCCTCGG CCGGCTCGCC GCCCTGGTCC CGGTCCTGCT GGGCCTCAGC
GTGATCGTCT TCCTGATCAT GGCGCTGATC CCGGGCGACC CGGCACTGGC CCTGCTCGGC
CCCTACGCGA CGCCCGAGGC GGTCGCCCGC ATCAACCGCG ACCTCGGCCT CGACCGCTCC
CTGCCGGTCC AGTACCTGAC GTGGCTCTCG CACGTGCTCA CCGGCGATCT CGGCCGCTCG
CACAGCCTCA ACCGCCCCGT CCTCGACGAG GTGGCGGAGC GCTTCGCCGC GACGCTGATC
CTGGCGGGGG CGGCGCTCGC CCTCGCCGCG CTCCTCGGCC TCGCCCTCGG GGTCGCGGCG
GCCCTGCGGC AATCGGGCTG GGTCGACCGG CTCGCCACGC TCGGCGTGCT GGTCGGCCTC
TCGGTGCCGT CCTTCTGGCT CGGGCTCCTG CTGATCCTGC TGGTCTCGGT GCGCTGGCGC
CTGCTGCCGG TGAGCGGCAT GCACGCGATC TACGGCGAGG AGACCCTGGC CGATCTCCTG
CGCCACCTCG CCCTGCCGGC CGCGACCCTG GCGGTGGTGG CGGCCGGGGT GATCGCCCGG
CTCACCCGCG CCGCCATGCT GGAGGTGCTG CGCCAGGACT TCGTCCGCAC CGCCCGCGCC
AAGGGCCTCG GCGAGGGGCG GATCGTGCTC CTCCACGCCG CCCGCGCCGC CCTGGTGACG
GTGATCCCGG TCATCGGCAC CCAGGCGGGC TTCGTGCTCG GCGGGGCGGT CTACGTCGAG
ACCGTGTTCC AGTGGCCGGG CATCGGCCGC ATGCTGGTCG GCGCCATCGC CACCCGGGAC
GTGCTCCTGG TCCAGGGCGG GGTGCTCGTC GTGGCGACGA CCTACGTGCT GGTGAACCTC
GCGGCCGACC TGCTGCAGCG GCTCGCCGAT CCGAGGATCG GCGGGTGA
|
|---|
| Protein sequence | MGRYLLGRLA ALVPVLLGLS VIVFLIMALI PGDPALALLG PYATPEAVAR INRDLGLDRS
LPVQYLTWLS HVLTGDLGRS HSLNRPVLDE VAERFAATLI LAGAALALAA LLGLALGVAA
ALRQSGWVDR LATLGVLVGL SVPSFWLGLL LILLVSVRWR LLPVSGMHAI YGEETLADLL
RHLALPAATL AVVAAGVIAR LTRAAMLEVL RQDFVRTARA KGLGEGRIVL LHAARAALVT
VIPVIGTQAG FVLGGAVYVE TVFQWPGIGR MLVGAIATRD VLLVQGGVLV VATTYVLVNL
AADLLQRLAD PRIGG
|
|---|
| |