Gene M446_5140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5140 
Symbol 
ID6131706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5648738 
End bp5650504 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content79% 
IMG OID641645275 
ProductABC transporter related 
Protein accessionYP_001771900 
Protein GI170743245 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.187142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0538978 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCC TCCTCGCCCG GCTGATGCGC AACCGCCCGG CGGCGGCGGG GCTCGTCGCG 
CTCGTCCTCG TCGGCGCGGT CTCGCTCGCC GCGCCGCTCC TGCCCCTCGC CGATCCCGAC
GCCACCGCGC CCGCCGCGCG GCTGCTGGCG CCCCTCACGC CGGGCGCGTG GCTCGGCACC
GACGCGCTCG GCCGCGACCT CCTGGCCCGG CTCGTCCACG GCACCCGGGT GAGCCTCGCG
GTCGGCCTCG CGGCGGCGGC GCTCGCGGCC GGGATCGGCT CGGGCCTCGG CCTCGTCGCG
GGCTTCGCCG GCGGCCGGAC CGAGGCGCTG CTGATGCGCC TCGTCGACGT GCTGATGGCC
TTCCCCTACC TGCTGCTCGC CCTCGCCGTG GTGGCGGCGC TCGGGCCGGG CCTCCTCAAC
GCCCTGGCGG CGGTGGTGGT CGCCAACATC CCGTTCTTCG CCCGCACCGT GCGGGGCGTG
GCCGCGACCC TGCGGGTGCA GGATTTCGTC GCCGCGGCGC GGCTCTCCGG CATGGGGCCG
GCCCGCATCC TCCTCGTCGA GATCCTGCCG AACGTCCTGC CGGTGATCGC CGTCACCGCC
TCGACCACGG TCGGCTGGAT GATCCTGGAG ACGGCCGGCC TGTCCTTCCT GGGCCTCGGG
GCGCAGCCGC CGCAGGCCGA TCTCGGGGCG ATGCTGGGGG AGGGGCGCCG CGTCCTGATC
GGCGCGCCCG CCGTGGCGGC GGTGCCGGGC TTCGCGGTCC TCCTGATCGT GCTCGCCCTG
AACCTCGTCG GCGACGGGCT GCGCGACGCC CTCGACCCGC GCCTCGCCGG CGGCCCGGCG
GCGCGGCCGG GCGCCGCGAC CCGGGTCGCG CGCCCTCCGC TCCCCGCCGC CCCGCCCGCG
GCCGGGCCCC CGCCCGCCGA CGGGCTCGCG GTCGCGGGCC TGCGCGTCGC CTTCGAGACG
CCGGCGGGCC GCGCCGAGGC GGTGCGGGGC GTCGACCTCG CGGTCGCCCC GGGGGAGTGC
CTCGGCCTCA TCGGGGCCTC GGGCTCGGGC AAGTCGGTGA CCGCCCACGC GATCCTGCGC
CTCGTCCCCT CGCCGCCGGG CCTCGTCACC GGGGGGGCGA TCCGCTTTCG CGGCGAGGAC
CTCCTCGCCC TGCCGCCCGC CGCCCTGCGC CGCCTGCGCG GGGACCGGAT CGCCTACGTG
TTCCAGGACC CGCTCACCAC GCTCCACCCG CTGATCCGGG TCGGGGACCA GGTCGCGGAG
GCGATCCGGG CGCATCGCCG GGTCGGGGCC GGGGAGGCGG CGAGCCGCGC CGAGGGGCTG
CTCGCCGCGG TCGCCCTGCC GGATCCCGGC CGCATCGCCC GCGCCTACCC GCACGAGCTC
TCCGGCGGGC AGCGCCAGCG GGTCGGCATC GCCATGGCGC TCGCCAACGA TCCCGACCTG
ATCGTCGCGG ACGAGCCGAC CACCGCCCTC GACGCCACCG TGCAGGCGGG GATCCTCGAC
CTGCTCGACC GGCTGCGCCG GGAGCGGGGC CTCGCGATCC TGTTCATCAG CCACGATGTC
GGGGTGGTGC GGCGGCTCTG CGACCGGGTC GCGGTGATGC AGGGCGGGCG GATCGTCGAG
GCCGGGGAGG CGGCGCGGGT GCTCTCGCGC CCGCAGCACC CCACCACCCG CGGCCTGATC
GCCGCGGTGC CGGTGCTCGG GCGCGCCCGG GCGCTGCTGG AGGCGGACGA GGCCGGCGGC
CGATCCGTGC CGGAGGAACG CGCGTGA
 
Protein sequence
MSGLLARLMR NRPAAAGLVA LVLVGAVSLA APLLPLADPD ATAPAARLLA PLTPGAWLGT 
DALGRDLLAR LVHGTRVSLA VGLAAAALAA GIGSGLGLVA GFAGGRTEAL LMRLVDVLMA
FPYLLLALAV VAALGPGLLN ALAAVVVANI PFFARTVRGV AATLRVQDFV AAARLSGMGP
ARILLVEILP NVLPVIAVTA STTVGWMILE TAGLSFLGLG AQPPQADLGA MLGEGRRVLI
GAPAVAAVPG FAVLLIVLAL NLVGDGLRDA LDPRLAGGPA ARPGAATRVA RPPLPAAPPA
AGPPPADGLA VAGLRVAFET PAGRAEAVRG VDLAVAPGEC LGLIGASGSG KSVTAHAILR
LVPSPPGLVT GGAIRFRGED LLALPPAALR RLRGDRIAYV FQDPLTTLHP LIRVGDQVAE
AIRAHRRVGA GEAASRAEGL LAAVALPDPG RIARAYPHEL SGGQRQRVGI AMALANDPDL
IVADEPTTAL DATVQAGILD LLDRLRRERG LAILFISHDV GVVRRLCDRV AVMQGGRIVE
AGEAARVLSR PQHPTTRGLI AAVPVLGRAR ALLEADEAGG RSVPEERA