Gene M446_5123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5123 
Symbol 
ID6130657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5628173 
End bp5628523 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content72% 
IMG OID641645258 
Productflagellar motor switch protein FliN 
Protein accessionYP_001771883 
Protein GI170743228 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00902465 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCCCG ACGACGAACT CGGCCTGCCC CAGCTCAGCG AGGCCGACCT CGCCTACGAC 
CCGAACGGCC ACGGCCCGCT GCGCGACGGC CCCCCGGCCC CCAAGAGCGC CGCCGACCTG
GAGCAGGTCT TCGACGTTCC GGTCGTGGTC TCCGCCGTGC TCGGCGCCTC CCGCATGCCG
GTCGGCGACC TGCTGCGCCT CGGCCCCGGC ACGGTGCTGG AACTCGACCG CAAGGTCGGC
GAGGCGATCG ACATCTTCGT CAACAACCGC CTCGTCGCGC GCGGCGAGGT GGTGCTGGTC
GAGGAGCGCC TCGGCGTCAC CATGACCGAG ATCGTCAAGA GCGACGGCTG A
 
Protein sequence
MAPDDELGLP QLSEADLAYD PNGHGPLRDG PPAPKSAADL EQVFDVPVVV SAVLGASRMP 
VGDLLRLGPG TVLELDRKVG EAIDIFVNNR LVARGEVVLV EERLGVTMTE IVKSDG