Gene M446_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5122 
Symbol 
ID6130656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5626660 
End bp5628024 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content73% 
IMG OID641645257 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001771882 
Protein GI170743227 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0127558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTC TCATCATCGG ACGCCTGAAC GGCGAACTCG TCACCGCCTC GAAGATCGCC 
ATGAGCCGGG GCGCGGCCGT CACCCAGGCG GACGGCGTCG AGCAGGGCCT CACGGTGTTG
CGCGCCAAGG GCGCCGACCT CGTCATGATC GACGTGGGGC TGCCGGTCCG CGCCTTCGTC
GACGCCCTCG CGGAGGAGCG CATCCGCACG CCGGTCGTCG CCTGCGGCAC CGGCTCGGAT
GCCAGGGCGG CGGTGGCGGC GATCCGGGCC GGGGCCAAGG AGTACATCCC GCTCCCGCCC
GACCCCGAGC TGATCGCCGC GGTGCTGGAG GCGGTGGCGG CGGACGCGCG CAGCTTCGTC
TGGCGCGACC CCGCCATGGA GCGGGTCGTG AAGCTCGCCG AGCAGGTGGC GCGCTCCGAC
GCCTCGGTGC TCATCAGCGG CGAGAGCGGC ACCGGCAAGG AGGTGCTCGC CCGCCACGTC
CACGCCAAGT CCGCCCGCGC GGGCAAGCCC TTCGTCAGCG TCAACTGCGC GGCGATCCCC
GACGCGCTGC TCGAATCCGA GCTCTTCGGC CACGAGAAGG GGGCCTTCAC CGGCGCGGTG
GCCCGGCGCA TCGGCAAGTT CGAGGAGGCC TCCGGCGGCA CGCTCCTCCT CGACGAGATC
TCCGAGATGG ACGTCCGGCT CCAGGCCAAG CTGCTGCGCG CCCTGCAGGA ACGCGTCATC
GACCGGGTCG GCGGCAGCCA GGGCGTGCGC GTCGATCTGC GGGTGCTCGC CACCTCGAAC
CGCAACCTCG CCGAGGAGGT CCGCAAGGGC ACCTTCCGGG AGGACCTGCT CTACCGCCTC
AACGTCGTCC ACCTGCGCCT GCCGGCCCTG CGCGAGCGCC CGGCCGACAT CCTCGAACTC
GCCCAGCACT TCGCCCGGAA ATACGCGGAG GTGAACGGCA TCCCGGCGCG GCCGCTCTCG
GCCGAGGCGC GCCGCCTCAT CGTCGCCAAT CCCTGGCGCG GCAACGTGCG CGAACTGGAG
AACACCCTGC ACCGGGCCGT CCTCCTGGCC CAGGGGGCGG AGATCGGCCC GGAGGCGATC
CGCTCCCCGG AGGGCGAGGC CCTCGACGGC GGGGCCGGCA CGGCGGCGCG GGCGGTTCAG
ACGGCCGAGG CGGTGACGCG CAGCCTCGTC GGGCGCACCG TCGCGGAAGT CGAGCGGGAC
CTCATCCTCG ACACGCTCGA CCATTGCCTC GGCAACCGCA CCCATGCGGC GCGGATCCTC
GGCATCTCGA TCCGCACCCT GCGCAACAAG CTCAACGAAT ACGCCCAGGC CGGGATCCTG
GTGCCCGAGC CCGGTCAGGC CCGCGCGATC GCGGCCTATG GTTGA
 
Protein sequence
MRLLIIGRLN GELVTASKIA MSRGAAVTQA DGVEQGLTVL RAKGADLVMI DVGLPVRAFV 
DALAEERIRT PVVACGTGSD ARAAVAAIRA GAKEYIPLPP DPELIAAVLE AVAADARSFV
WRDPAMERVV KLAEQVARSD ASVLISGESG TGKEVLARHV HAKSARAGKP FVSVNCAAIP
DALLESELFG HEKGAFTGAV ARRIGKFEEA SGGTLLLDEI SEMDVRLQAK LLRALQERVI
DRVGGSQGVR VDLRVLATSN RNLAEEVRKG TFREDLLYRL NVVHLRLPAL RERPADILEL
AQHFARKYAE VNGIPARPLS AEARRLIVAN PWRGNVRELE NTLHRAVLLA QGAEIGPEAI
RSPEGEALDG GAGTAARAVQ TAEAVTRSLV GRTVAEVERD LILDTLDHCL GNRTHAARIL
GISIRTLRNK LNEYAQAGIL VPEPGQARAI AAYG