Gene M446_5093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_5093 
Symbol 
ID6131652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5589565 
End bp5590758 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID641645228 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001771853 
Protein GI170743198 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.432845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGTC CCCTCGCGGG CATTCGCGTG CTGGAACTCG GCCAGCTGAT CGCCGCGCCC 
TTCGCCACGC GGCTGATGGC GGAGTTCGGC GCCGAGGTGA TCAAGGTCGA GCCGCCGGGA
CAGGGCGACC CCCTGCGCAA GTGGCGCAAG ATGCACGAGG GCACCTCGCT CTGGTGGTAC
CTGCAGTCGC GCAACAAGAA GTCGATCGCC GTCAACCTGA AGTCGCCCGA GGGGCTCGAG
ATCGTCCGCG ACCTCGCCCG CGGCGCCGAC GTGGTGGTGG AGAATTTCCG GCCCGGCGGC
CTGGAGAAGC TCGGCCTCGG CTGGGACGTG CTCTCGGCCC TCAACCCGAA CCTGGTGATG
GTGCGCATCT CGGGCTACGG CCAGACCGGC CCCTACCGCG ACCGCCCGGG CTTCGGCGCC
ATCGGCGAGT CGATGGGCGG GATCCGCTTC ACCACCGGCA GCCCGGACGC CCCGCCGGCC
CGGGTCGGGG TCAGCATCGG CGACACGCTC GCCTCGCTGC ACGGGGTGAT CGGCGCCCTG
ATGGCGCTGT TGCGGGTGAA GACCGGCCAG GGCGGCGGCC AAGTGATCGA CGTGTCGCTC
GTCGAGAGCG TGTTCAACGT GATGGAGAGC CTCGTGCCCG AGTACGACCT CCTCGGCGAG
GTCCGCACGC GGACGGGCGG CGCGCTGCCC GGCATCACGC CCTCCAACAC CTACCCGACC
CGGGACGGCG GCTACGTCGT CATCGCGGGC AACAGCGACC CGATCTTCCG CCGGCTGATG
GCGGCGATCG GCCGGCCCGA CCTCGCCGAG GCCCCGGCGC TCGCCAGCAA CGACGGCCGC
TCGCGCCAGG CCGGGATGCT CGACGACGCC ATCGCGGACT GGACGCGGGC GCGCAGCGTC
GAGGAGGCGC TGGCGGCGCT CGACGCGGCC GACGTGCCGG CCGGCCGCAT CTACTCGGTG
GCCGACATCG TCGCCGACCC GCACTACCAG GCCCGCGACA TGATCCTGCA GGCCGAGCTG
CCCGGCGGCG CCCGGGTGAA GATGCCGGGC ATCGTGCCCA AGCTCTCCGA GACCCCCGGC
ACGGTGCGCT GGCAGGGGCC GGCGCTCGGC GCCCACACCG ACGCGGTGCT GACCGAACTC
GGCCTCGACG CCGAGCGCAT CGCCCGCCTG CGCGACGCGG GAGCGGTGGC ATGA
 
Protein sequence
MSGPLAGIRV LELGQLIAAP FATRLMAEFG AEVIKVEPPG QGDPLRKWRK MHEGTSLWWY 
LQSRNKKSIA VNLKSPEGLE IVRDLARGAD VVVENFRPGG LEKLGLGWDV LSALNPNLVM
VRISGYGQTG PYRDRPGFGA IGESMGGIRF TTGSPDAPPA RVGVSIGDTL ASLHGVIGAL
MALLRVKTGQ GGGQVIDVSL VESVFNVMES LVPEYDLLGE VRTRTGGALP GITPSNTYPT
RDGGYVVIAG NSDPIFRRLM AAIGRPDLAE APALASNDGR SRQAGMLDDA IADWTRARSV
EEALAALDAA DVPAGRIYSV ADIVADPHYQ ARDMILQAEL PGGARVKMPG IVPKLSETPG
TVRWQGPALG AHTDAVLTEL GLDAERIARL RDAGAVA