| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_5043 |
|---|
| Symbol | |
|---|
| ID | 6135696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | + |
|---|
| Start bp | 5524053 |
|---|
| End bp | 5524955 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641645179 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001771804 |
|---|
| Protein GI | 170743149 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00853617 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCG TCGTCGTCGA TCCGAGCCGG GTCGTGCTGA AGGTGATCGG CGGGCTGCTC
GACCCGCGCG GCCACACCGT GAACACCTTC ACGGATTCGC GCGAGGCGCT CGACTACGTG
ACCGCCAACG AAGCCGTCAC GGCGCTGATC ACCAGCCTGG AGGTGCGGCC GCTGACCGGG
CTCGAACTGT GCTGGTCGGC CCGCCTGCTG GCGGAGGCGC ACCGCCCCCT CTACATCATC
GCGATGTCCT CGGCCCGCAA CGCCCGCAAC CTCGCCGAGG TGCTCGACAG CGGCGCCGAC
GACTTCATCG ACAAGCCCCC GGGCGGCGAG GAGCTCTACG CCCGGCTGCG GGCCGCCGAG
CGCGTGACCC GGATGCAGCG CGAGCTGATC CGCCTCGCCG AGACCGACTC GCTCACGGAA
CTCCTGAACC GCCGCGCCTT CGTGCAGCGG GTGGCCGAGA TCGCCGGGCG CGCGGGCAAC
CATGGCAAGC TCGCCCTCGT CGTCGCGGAC ATCGACAATT TCAAGCGCAT CAACGACGAG
CACGGCCACG CCCTCGGCGA CGTCGCCATC CAGGGCGTGG CGACCGCCCT CTCGGAGGTG
CCGGACTCGC TCGTCGGGCG CCTCGGCGGC GAGGAATTCG GCGTCGCCCT CCCGGGCCGG
AGCCTGGAGG AGGCCGAGGC CATCGCCAAC CGCCTGCGGC TGCGCTGCAC GCAGCTGCGC
TTCAAGGGCC GGCACGGCCC GGTCCAGCTC AGCTGCAGCT TCGGGGTGAG CGCGTGGTCG
GAGGGCGAGA CGATCGAGGG CCTGCACAAG CGGGCCGACA TTGCCCTCTA CGAGGCGAAG
GCGACCGGGC GCAACCGCGT GGTCTCCGCC TTCACGGACC TCGTCCTCGC CCGCGCGGGC
TGA
|
|---|
| Protein sequence | MHIVVVDPSR VVLKVIGGLL DPRGHTVNTF TDSREALDYV TANEAVTALI TSLEVRPLTG
LELCWSARLL AEAHRPLYII AMSSARNARN LAEVLDSGAD DFIDKPPGGE ELYARLRAAE
RVTRMQRELI RLAETDSLTE LLNRRAFVQR VAEIAGRAGN HGKLALVVAD IDNFKRINDE
HGHALGDVAI QGVATALSEV PDSLVGRLGG EEFGVALPGR SLEEAEAIAN RLRLRCTQLR
FKGRHGPVQL SCSFGVSAWS EGETIEGLHK RADIALYEAK ATGRNRVVSA FTDLVLARAG
|
|---|
| |