Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_5030 |
Symbol | |
ID | 6129472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 5509455 |
End bp | 5510894 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641645166 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_001771791 |
Protein GI | 170743136 |
COG category | [R] General function prediction only |
COG ID | [COG4249] Uncharacterized protein containing caspase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0195468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGGT GGAGACTGGG ACCGCTCCTG ATCCTGGCGG CATGCCTCCT GACCGGGACG GGGGCCTCGG CGGCCGACCG GCGCGTCGCC CTGGTGATCG GGAACTCCGC CTACCGCTCC GTGCCGGTGC TCGCCAATCC GGGCCGCGAC GCCTCGGCCA TGGCGGAGAT GCTGCGCCGG GCGGGCTTCG AGTCGGTCGA CCTGAGGCAG GATCTCGGCA CGGTCGAGCT GAAACGCACC GTGCGGGAAT TCATGCAGAC TAGCCGCGAC GCGGACGTTG CGGTGGTGTT CTTCGCCGGC CACGGCATCG AGGTCGCGGG GGTCAACTAC CTGATCCCGA CCGATGCCCG CCTGCGGACC GATTTCGACG TCGAGGACGA GGGTTTGTCG CTGGAGCGGG TGATCCGCGC GATCGAGCCG GCGCGGCGCC TGCGCCTCGT CATCCTGGAT GCCTGCCGCA ACAACCCGTT CAACGTCGGC ATGCAGCGGA TGGTGAGCAT CCGGGGCGTG GCGAACGGCC TCGCCAAGGT GGACCCGCTG ATCAGCGACA CCCTCGTGGC CTTCGCGGCC AAGGCCGGGT CGGTCGCCGA CGACGGCGGC GGCGACCACA GCCCCTTCAC GACGGCGATG CTCAAGCACC TCGCGGCGCC GGGCCTCGAC GTGCGGGTCG CCTTCGGGCG GGTCCGCGAC GAGGTTCTGC GCCTCACCGG CGGCAAGCAG GAGCCCTTCG TCTACGGCTC CCTCGGGGGC GCCACCATGG CGCTGGTGCC GGACGTCAGG GCCGCCGACC CGGAGGGCGA CCCCAAGGAG ATGCGGCGCG ACTACGAATT CGCCGAGCGC GTCGGCACGC GGGAGGCGTG GTCCTCCTTC CTGGCCGCGC ATCCGGCCGG CTTCTACGCG GATCTGGCCC GCGCCCAGGT GGCCAAGCTC ACGGGCAGCC CGGCCGCGCC GCCGGCCGGC GAGCCAGCCC GCCGGCCGCT CCCGCAGACG CGGCCGGTCG GCACCGACCC GGCGACCGCC GCCGTCGCGC CCGGCCCCGC CGCTTCCCCG CCCGGCGCCG AGCACAACGG GGCCTGCCAG CGCGAGGCCC AGACCCTCGC CCGCCTGCGC GCGACCCGCG CGCCGGAGGC AGTGCTGCGC TTCGAGCGCG AATTCACCTG CGAGGCGCTG CGCCCGCAGC TCGCCCGGCT GATCGAGGCG GTGCGTCCGC CCGCACCGCC TTCCGTTCTG CCCGACCCGA TCCCGCCGAT CCCCGGCGAG CCGCTGACGA CGAGCACGGC GCGGGCGACC CCGGGCGCCT GCGAGCGCGA GGCCCAGATC CTCGCCCAGC TGCGCAACAG CCGCGACGTG CCGGCGATCG ACCGCTTCGC GCGCGACCTC AGCTGCCAGG AGCTGCGCCC GCAGCTGCAG CGCCTGCGCG AGAGCGTGGG CGAGGAGTGA
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Protein sequence | MLRWRLGPLL ILAACLLTGT GASAADRRVA LVIGNSAYRS VPVLANPGRD ASAMAEMLRR AGFESVDLRQ DLGTVELKRT VREFMQTSRD ADVAVVFFAG HGIEVAGVNY LIPTDARLRT DFDVEDEGLS LERVIRAIEP ARRLRLVILD ACRNNPFNVG MQRMVSIRGV ANGLAKVDPL ISDTLVAFAA KAGSVADDGG GDHSPFTTAM LKHLAAPGLD VRVAFGRVRD EVLRLTGGKQ EPFVYGSLGG ATMALVPDVR AADPEGDPKE MRRDYEFAER VGTREAWSSF LAAHPAGFYA DLARAQVAKL TGSPAAPPAG EPARRPLPQT RPVGTDPATA AVAPGPAASP PGAEHNGACQ REAQTLARLR ATRAPEAVLR FEREFTCEAL RPQLARLIEA VRPPAPPSVL PDPIPPIPGE PLTTSTARAT PGACEREAQI LAQLRNSRDV PAIDRFARDL SCQELRPQLQ RLRESVGEE
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