Gene M446_4912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4912 
Symbol 
ID6132723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5396204 
End bp5397064 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content71% 
IMG OID641645048 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001771675 
Protein GI170743020 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.194247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TGCGTTACGG CCCCGCGGGC CAGGAGAAGC CCGGCCTCCT CGATGCGGAG 
GGCCGCCTGC GCGACCTGTC GGGACACGTC GCCGAGATCG GTCCCGACAC GCTCTCGCCC
GCCGGCCTCG CGGCGCTCGC CAAGCTCGAC CCGGCCGGCC TGCCCCGCGT CGAGGGCTCG
CCGCGGCTCG GCGTGCCGCT CGCCGGGGTC GGCAAGTTCA TCGCCATCGG CCTGAACTAC
GCGGACCACG CGGCCGAATC GAACCTGCCG ATCCCCAAGG AGCCGGTGGT GTTCACCAAG
GCGATCAGCT CGCTCTCCGG TCCCAACGAC CCGGTGATGC TGCCGCGCGA CTCGGTGAAG
AGCGACTGGG AGGTCGAGCT CGGGATCGTG ATCGGTCGCC GCGCCGCCTA CGTCGAGCAG
GCGGAGGCGC TCGACTACGT CGCCGGCTAC TGCGTGGTGA ACGACGTCAG CGAGCGCGAG
TACCAGATCG AGCGCGGCGG TACCTGGGAC AAGGGCAAGG GCTGCGACAC GTTCGGGCCG
GTCGGGCCCT GGCTCGTCAC CGCGGACGAG GTCGGCGACC CGCAGAGCCT CGACATGTGG
CTCGATCTCA ACGGCCGGCG CATGCAGACC GGCAACACCC GGACGATGAT CTTCCCCTGC
GCGGAGATCG TCTCCTACGT CAGCCGCTTC CTCACGCTGA TGCCGGGCGA CATCATCACC
ACCGGCACGC CCCCGGGCGT CGGCATGGGC ATCAAGCCGG AGCCGGTCTT CCTGAAGCCC
GGCGACGTGA TGACGCTCGG CATCGAGAAG CTCGGGACCC AGCGCCAGGA CGTGGTGGCG
TGGCGCCGGC AGGAGGGCTG A
 
Protein sequence
MKLLRYGPAG QEKPGLLDAE GRLRDLSGHV AEIGPDTLSP AGLAALAKLD PAGLPRVEGS 
PRLGVPLAGV GKFIAIGLNY ADHAAESNLP IPKEPVVFTK AISSLSGPND PVMLPRDSVK
SDWEVELGIV IGRRAAYVEQ AEALDYVAGY CVVNDVSERE YQIERGGTWD KGKGCDTFGP
VGPWLVTADE VGDPQSLDMW LDLNGRRMQT GNTRTMIFPC AEIVSYVSRF LTLMPGDIIT
TGTPPGVGMG IKPEPVFLKP GDVMTLGIEK LGTQRQDVVA WRRQEG