Gene M446_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4880 
Symbol 
ID6132648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5359082 
End bp5359867 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content76% 
IMG OID641645016 
ProductHpcH/HpaI aldolase 
Protein accessionYP_001771643 
Protein GI170742988 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0747669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC GGGGTGGGGC GGTGGCGGCG CTCGCGGCGC GGATGCGGGA GGGCACGCCC 
CTCGTCTCCG CCTGGTGCGG GATCCCCGAG CCGGCCGTGG CCGGGCTCCT CGCGGCGGAG
CCCGGCTTCG ACGCGATCAC GCTCGACATG CAGCACGGCG GCTTCGACGA GGCGGCGGTC
GCGCGCACGG TTCCGCTCGT GGCAGCCCGC GGCAAGCCGA CCCTGGCGCG GGTGCCGGTG
GCGGCCTTCA ACACGGTGTC GCGGGTGCTC GACGCGGGCG TCTCGGCGGT GATCGCCCCG
ATGGTGAACA GCGCCGAGGA GGCGGCCATG CTCGCCACCT TCGCCAAGTA CCCGCCGCTC
GGCGCGCGCA GCTGGGGACC GCTGCCGGCC CTCGCCCTGT CGGGTCTCGG GGGCGATCAC
TACCTCAAGG AGGCGAACGG CTTCTGCCTG ACGCTGGCGA TGGTCGAGAC CCGCGAGGCC
CTGGACGCGG TGGACGCGAT CCTGGCGGTC GAGGGCATCG ACGGCATCTT CATCGGCCCC
TCCGACCTCT CGATCGCGCT CTCGGGCGGC GCCGCCCTCG ATCCGGGCGG CAGCGTGGTG
CGCGCGGCCC TCGACCACGC CAAGGCGCGG GCGCGCGCGG CCGGCAAGCG GATCGGCGTC
TACGCCCATT CGCCGGCCCG CGGGCGCGAG AACGTGCAGG AGGGCTTCGA CCTCGTCGCG
CTGATGGGCG ACGGGGCGCT GCTGCGGCTC GGCGCCCAGG CGGCGCTCAA GGAGGTGCGG
GGGTGA
 
Protein sequence
MAERGGAVAA LAARMREGTP LVSAWCGIPE PAVAGLLAAE PGFDAITLDM QHGGFDEAAV 
ARTVPLVAAR GKPTLARVPV AAFNTVSRVL DAGVSAVIAP MVNSAEEAAM LATFAKYPPL
GARSWGPLPA LALSGLGGDH YLKEANGFCL TLAMVETREA LDAVDAILAV EGIDGIFIGP
SDLSIALSGG AALDPGGSVV RAALDHAKAR ARAAGKRIGV YAHSPARGRE NVQEGFDLVA
LMGDGALLRL GAQAALKEVR G