Gene M446_4875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4875 
Symbol 
ID6132969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5354847 
End bp5355524 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content75% 
IMG OID641645011 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_001771638 
Protein GI170742983 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0747669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGC GCTTCGGAAT CCTCGCCTTC CCCGCCGTCC AGCAGCTCGA CCTGACCGGT 
CCCTACGAGG TCTTCGCCTC GGCGGGCGAC GCGGAGGTCC ACCTGCTCTG GAAGGATCGC
CGGCCCCTGA CCTCCGCCAC GGGCCTGATC CTCGCGCCGA CGACGACCCT TGCGGAATGT
CCGGCCCTCG ACGTGCTCTG CGTGCCGGGC GGGGCGGGCG TGAACGCGCT CCTGGAGGAT
GCGGAGGTGA TCGGCTTCCT GCGCGACCGG GCCGCGGGGG CGCGCTTCGT GACCTCCGTC
TGCACCGGGG CGCTGGTCCT CGGCGCGGCC GGGCTCCTCG CCGGCAAGCG GGCCACCACG
CACTGGAACG CCCTCGATCT CCTGGCGCAT TTCGGCGCGA CGCCGGTCGA GGCGCGGATC
GTGCGGGACG GGTCCCTCAT CACCGCGGGC GGCGTCACGG CGGGGATCGA TTTCGGTCTC
GCACTGGTGG CGGCCCTGCG CGGCCGGGAC CAGGCGGAGG CGATCCAGCT CGCCCTCGAA
TACGCGCCGG CGCCGCCCTT CTCGGCCGGA ACGCCGCGGG AGGCCCCGCC GGAGATCGTC
GCCCTCGTCC GGGACAGGCT CTCCGGATCG CGGGCGGCCC GCGAGGCGAT CCTGGCCCGA
CTGCCGCGGA TCGGCTGA
 
Protein sequence
MPLRFGILAF PAVQQLDLTG PYEVFASAGD AEVHLLWKDR RPLTSATGLI LAPTTTLAEC 
PALDVLCVPG GAGVNALLED AEVIGFLRDR AAGARFVTSV CTGALVLGAA GLLAGKRATT
HWNALDLLAH FGATPVEARI VRDGSLITAG GVTAGIDFGL ALVAALRGRD QAEAIQLALE
YAPAPPFSAG TPREAPPEIV ALVRDRLSGS RAAREAILAR LPRIG