Gene M446_4866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4866 
Symbol 
ID6134115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5343748 
End bp5344701 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content74% 
IMG OID641645002 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001771629 
Protein GI170742974 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.329255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCT TCCTCGCCTT CCTCGGCCGC TTCGCCGTCA CGGGCCTCCT GGTCCTGGTC 
GCGCTGGTGG TCGGCGCCGC CCTCTGGGAC TATTACCTGG AGGCCCCCTG GACCCGCGAC
GGGCGCGTGC GCGCCGAGGT GGTCGGCGTC GCCCCGGACG TGTCCGGGCT GGTCCGCGAC
GTCGACGTGA AGGACAACCA GGAGGTGAAG CGCGGCGACC TCCTGTTCCG CATCGACCCG
GAGCGCTTCA CCCTGGCCCT GCGCCAGGCC GAGGCGGTGG TGGCGGGGCG CAAGGCGACG
CTGACCCAGG CCGAGGCCGA CCTCGCCCGC TACCAGCAGC TCAGCGACAA CGTCGTGTCG
CAGCAGCGGC TCGAACAGGC GCTCGCCACC GAGCAGGGTG CCCGCGCGGC CTACGACCAG
GCGGTGGCGG ACCGCGACCT CGCCAAGCTC AACCTCGCCC GCTCCGAGGT GCGCGCCTCG
GTCAACGGCC GCATCTCGAA CCTCGAACTG CGCCCCGGCA GCTACGTGGC CACCGGCAAG
GCCGTGCTGG CGCTCGTCGA CCGCGACACG CTCCACGTGG AGGGCTACTT CGAGGAGACG
AAGCTCGACC GCATCCGGGT CGGCGACCCG GTGAGCATCC ACCTGATGGG CGGCGGCCGC
GACCTGGCCG GGCGCGTCGA GAGCGTGGCG GCCGGCATCG AGGATCGGGA GCGCAGCGCC
GGGGCCAACC TCCTCGCCAA CGTGAACCCG ACCTTCGCCT GGGTGCGGCT TGCCCAGCGC
GTGCCGGTGC GGGTCACCCT CGACCCGTCC CCGGCGCTGG CGCAGCTGAC CGTCGGGCGG
ACCGCGACCG TGGTGGTGCG GGGCCGCGGC GAGGGCGAGC CGCGCCCCCT CGACGGGCTC
TGGCAGCGCT GGCAGGCCCT CCGGAGCACG CTCGCCACCA GCCGCAAGGG TTGA
 
Protein sequence
MTRFLAFLGR FAVTGLLVLV ALVVGAALWD YYLEAPWTRD GRVRAEVVGV APDVSGLVRD 
VDVKDNQEVK RGDLLFRIDP ERFTLALRQA EAVVAGRKAT LTQAEADLAR YQQLSDNVVS
QQRLEQALAT EQGARAAYDQ AVADRDLAKL NLARSEVRAS VNGRISNLEL RPGSYVATGK
AVLALVDRDT LHVEGYFEET KLDRIRVGDP VSIHLMGGGR DLAGRVESVA AGIEDRERSA
GANLLANVNP TFAWVRLAQR VPVRVTLDPS PALAQLTVGR TATVVVRGRG EGEPRPLDGL
WQRWQALRST LATSRKG