Gene M446_4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4827 
SymbolrpsB 
ID6133656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5304786 
End bp5305835 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content70% 
IMG OID641644964 
Product30S ribosomal protein S2 
Protein accessionYP_001771591 
Protein GI170742936 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.356192 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0170734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTC CCGATTTCTC GATGCGTCAG CTCCTCGAAG CCGGCGCCCA TTTCGGCCAC 
CAGTCGCACC GCTGGAACCC GAAGATGCAG CCCTTCATCT TCGGCACCCG CAACAACATC
CACATCATCG ACCTCGCCCA GACCGTGCCG GCGCTCTACC AGGCGCTGCA GGCGGTGAGC
GACACCGTCG CCAAGGGCGG CCGGGTGCTG TTCGTCGGCA CCAAGCGCCA GGCCGCGGAC
GTGGTGGCGG ATTCCGCGCG CCGCTCGGCC CAGTACTTCG TGAATTCCCG CTGGCTCGGC
GGCACGCTCA CCAACTGGAA GACCATCTCG GGCTCGATCC AGCGCCTGCG CAAGGTCGAC
GAGGTCCTGG CCGGCGGCGG CCAGGGCCTC ACCAAGAAGG AGCGCCTGAT GCTGTCCCGC
GAGAAGGACA AGCTCGAGAA GGCGCTCGGC GGCATCAAGG ACATGGGCGG CGTGCCCGAC
CTGCTGTTCG TGATCGACAC CAACAAGGAG CAGCTGGCGA TCAAGGAGGC CAAGCGCCTC
GGGATCCCGG TCGCCGCCAT CGTCGACACC AACTGCGACC CGGACGGCAT CACCTACGTG
GTCCCGGCCA ACGACGACGC GGGCCGCGCG ATCGCGCTCT ACTGCGACCT CATCGCCCGC
GCGGCGATCG ACGGCATCTC CCGCGGCCAG GGCGCGCTCG GCCTCGACAT CGGTGCCTCG
GAGGAGCCGG TCGCCGAGGA ACTGCCGGCC AACCTCAACG AGCCGGAGGT GGCGCAGGTC
GACATCAGCG AGCCCTACGT GGGCGAGCCC TTCGAGCTGC TCGCCGCCCC GCGCGGCGCG
CCCGACGACC TGACCAAGCT CACGGGCGTC GGCCCGCAGC TCGTCCAGAA GCTCAACGAC
GCCGGCATCT ACCACTACTG GCAGATCGCC GCGATGGCGC CCGAGGACGT GGCCAAGGTC
GATGCCGAGC TGAAGCTCAA CGGCCGCATC GCGCGCGACG GCTGGATCAA CCAGGCCCGC
GCCTTCGTGG AGGCCGCCGC GGCCGCGTGA
 
Protein sequence
MALPDFSMRQ LLEAGAHFGH QSHRWNPKMQ PFIFGTRNNI HIIDLAQTVP ALYQALQAVS 
DTVAKGGRVL FVGTKRQAAD VVADSARRSA QYFVNSRWLG GTLTNWKTIS GSIQRLRKVD
EVLAGGGQGL TKKERLMLSR EKDKLEKALG GIKDMGGVPD LLFVIDTNKE QLAIKEAKRL
GIPVAAIVDT NCDPDGITYV VPANDDAGRA IALYCDLIAR AAIDGISRGQ GALGLDIGAS
EEPVAEELPA NLNEPEVAQV DISEPYVGEP FELLAAPRGA PDDLTKLTGV GPQLVQKLND
AGIYHYWQIA AMAPEDVAKV DAELKLNGRI ARDGWINQAR AFVEAAAAA