Gene M446_4788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4788 
Symbol 
ID6132396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5263185 
End bp5263739 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content77% 
IMG OID641644925 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001771552 
Protein GI170742897 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.405562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.250869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG CGAGGGCTCT CTTCGACGCG ACCGTGCTGC CGCATCTCGA CGCGGCCTAC 
AGCCTCGCGC GCTTCCTCGC CCGGGACGCG GATGCGGCCG AGGACATCGT GCAGGAGGCG
ATGCTGCGGG CCTTCCGCGG CTTCGACGGC TTCCGGGGCG GCGACGCCCG GGCGTGGCTC
CTCGCCATCG TCCGCAACTG CGCCCGGAGC TGGGCGGCGG CGCGCCCCCG GGCGGCCGCC
GGCGCGGCGG AGGAGGGCGG CCCCGAGGAC CCCTGGGACC GGGAGGCCGA GACGCCCGAG
GCGTCCCTCG CCCGGGGCGA CGAGATCGCC GCCGTGCGCG CCCTGGTGGC GGCCCTGCCG
GAGCCGTTCC GGGAGACGCT CGTCCTGCGC GAGCTGGAGG ATCTGTCCTA CCGCGACGTC
GCGGCGGTGA CGGGCGTGCC GGTCGGCACG GTGATGTCGC GCCTCGCCCG GGCGCGGGCC
CTGTTCGGCG CCGCCTGGCG CCGCCGCTTC GGGGAGGAAT CCCTGCCCGT CCCCAAGGAG
CACGAAACGC CATGA
 
Protein sequence
MIRARALFDA TVLPHLDAAY SLARFLARDA DAAEDIVQEA MLRAFRGFDG FRGGDARAWL 
LAIVRNCARS WAAARPRAAA GAAEEGGPED PWDREAETPE ASLARGDEIA AVRALVAALP
EPFRETLVLR ELEDLSYRDV AAVTGVPVGT VMSRLARARA LFGAAWRRRF GEESLPVPKE
HETP