Gene M446_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_4787 
Symbol 
ID6132395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp5262427 
End bp5263188 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content76% 
IMG OID641644924 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_001771551 
Protein GI170742896 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.755024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.258928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CCCGTCCCGA TCCCTGCCGC GACCGCGCGC TGCTGCTCCA CGGGCTCCTC 
GACGGGGAGC TCGACGCCGC CCACGCGCTC GGGCTGGAGG CGCATCTCGA GTCCTGCCCG
GCCTGCCGCG CGGCGTACGG GCGATTGCGG GAGGAGCGCG ACCTGCGCCG CCGCGACGGG
GTGCGCCATT CCGCCCCGGC GGCCTTGCGG CGGCGCGTGG CGGCGGCCCT CGACGCGGAG
GAGGCCGCCC GGTCCCCGGC GCGGCCGCTG CGCCGGCTGC TCGCCCCGGC CGCCCTGGCC
CTGGCGGCGA GCCTCGCGGT CGCATTCCTG CCGCTCGGCC TCGACCGGAA CGGGGCCCTG
CGCGACGACC TCGTCTCCGG CCATGTCCGC TCGCTCCTCG CGAACCACCT CACGGACGTC
CCGTCCAGCG ACCAGCACAC CGTGAAGCCG TGGTTCTCCG GCAGGCTCGA CTTCGCGCCG
CCGGTCGTCG ACCTGTCGGA TCGCGGCTTC GACCTGGTCG GCGGGCGCCT CGACTATGTC
GGCGGCCGGG TCGTGGCGGC CCTGGTCTAC CGGCGGCGCG GGCACGTCAT CAACCTGTTC
GTCTGGCCGG GCAGCGGCGG CTGGTCCGCC GGCAGCGCGC GGGAGGGCTA CGGCCTGCTG
CACTGGTCGC AGGCCGGGCT GACCTTCTGG GCCGTCTCCG ACCTCAACCC CACCGAGCTG
CAGGAATTCG AGCAGGATTT CGCGGCCCGC GCGCCGCGCT GA
 
Protein sequence
MSAPRPDPCR DRALLLHGLL DGELDAAHAL GLEAHLESCP ACRAAYGRLR EERDLRRRDG 
VRHSAPAALR RRVAAALDAE EAARSPARPL RRLLAPAALA LAASLAVAFL PLGLDRNGAL
RDDLVSGHVR SLLANHLTDV PSSDQHTVKP WFSGRLDFAP PVVDLSDRGF DLVGGRLDYV
GGRVVAALVY RRRGHVINLF VWPGSGGWSA GSAREGYGLL HWSQAGLTFW AVSDLNPTEL
QEFEQDFAAR APR