Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_4774 |
Symbol | |
ID | 6130058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 5250447 |
End bp | 5251466 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641644911 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001771538 |
Protein GI | 170742883 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.572869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.214475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGA TCTCGCGCCG CCGCGCGCTC CAGCTTTCCC TCGCGGGCGC CGTCGCGGCC CCGGCCGTGA TGCGGATCAG CCGCGCGCAG GCCGCCGACT TCAACCTCAA GGTCGCCAAC AACAGCCCGG TCAGCCATCC GCTCACCATC TACATGCAGA AGGCCGCGGA CGGGATCCGC GAGGAGACCG GCGGCAAGGT CGACATCAAG GTCTTCCCGA ACAACCAGCT CGGCGGCGAC ACCGACATGC TGAGCCAGCT GCGCTCGGGG GCGCTCGAGT TCTTCAGCCT CTCGCCGCTG ATCCTGGCGA CCCTGGTGCC CGGCGCGGCG ATCAGCGGCA TCGGCTTCGC GTGGTCGTCC TACGACAAGC TGTGGCCGGC CATCGACGGC GATCTCGGCG CCCATGTCCG CGAGCTGATC GGCAAGTCGG GCCTCTACGC CTTCGACCGC ATCTGGGAGA ACGGCTTCCG CCAGACCACC TCCTCCACCA AGCCGATCCT GACGCCGGAC GACTTCAAGG GCTTCAAGAT CCGGGTCCCG CCGAGCCCGC TCTGGACCTC GATGTTCAAG GCCTTCGACG CGGCGCCGAT GACCATCAAC TTCGCGGAGG TCTACTCGGC CCTGCAGACC AAGATCGCGG AGGGCCAGGA GAACCCGCTC GCGCTGATCG ACGCGGCCAA GCTCTACGAG GTGCAGAAGC ACCTCTCGAA GACGAACCAC ATGTGGGACG GCTTCTGGCT GCTCGCCAAC GGCAAGGTCT GGCGCGGCCT GCCGGAGGAC GTGCGCGGCG TGATCGCCAA GCACTTCAAC ACCCAGGCGG TGGCGCAGCG CGAGGAGACG GCGCGCCGCA ACGTCTCGAC CGAGAAGGAC CTCGCGGCCA AGGGCCTGAC CTTCCACGAC GTGGACACCA AGGCGTTCCA GGCCAAGCTG CAGGCGGCCG GGTTCTACAA GGAGTGGAAG GGCAAGTTCG GCCCGGAGGC GTGGGCGCTG CTCGAGAAGC ACACCGGCCC GATCGCCTGA
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Protein sequence | MTSISRRRAL QLSLAGAVAA PAVMRISRAQ AADFNLKVAN NSPVSHPLTI YMQKAADGIR EETGGKVDIK VFPNNQLGGD TDMLSQLRSG ALEFFSLSPL ILATLVPGAA ISGIGFAWSS YDKLWPAIDG DLGAHVRELI GKSGLYAFDR IWENGFRQTT SSTKPILTPD DFKGFKIRVP PSPLWTSMFK AFDAAPMTIN FAEVYSALQT KIAEGQENPL ALIDAAKLYE VQKHLSKTNH MWDGFWLLAN GKVWRGLPED VRGVIAKHFN TQAVAQREET ARRNVSTEKD LAAKGLTFHD VDTKAFQAKL QAAGFYKEWK GKFGPEAWAL LEKHTGPIA
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